Evidence map›Paper›PMID 24251446›Full record

ArticleBiochemistry2013

Lipoamide channel-binding sulfonamides selectively inhibit mycobacterial lipoamide dehydrogenase.

Ruslana Bryk, Nancy Arango, Christina Maksymiuk, Anand Balakrishnan, Ying-Ta Wu, Chi-Huey Wong, Thierry Masquelin, Philip Hipskind, Christopher D Lima, Carl Nathan

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Kunkel Lecture: Fundamental immunodeficiency and its correction.The Journal of experimental medicine · 2017
    Review
  11. Article
  12. Article
  13. Article
  14. Mycobacterium tuberculosis metabolism.Cold Spring Harbor perspectives in medicine · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Ruslana BrykDepartment of Microbiology and Immunology and ‡Department of Pharmacology, Weill Cornell Medical College , New York, New York 10065, United States.
Nancy Arango
Christina Maksymiuk
Anand Balakrishnan
Ying-Ta Wu
Chi-Huey Wong
Thierry Masquelin
Philip Hipskind
Christopher D Lima
Carl Nathan
Eli Lilly (United States) · USGenomics Research Center, Academia Sinica · TWCornell University · USHoward Hughes Medical Institute · USKettering University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Elisa de Stanchina · 1985 to 2026
$347.4M
Targets in Mycobacterium Tuberculosis: Stress Resistance & RepairR01AI064768 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI NATHAN, CARL FRANCIS · 2005 to 2015
$8.6M
NCI NIH HHS P30 CA008748NIAID NIH HHS AI064768NIAID NIH HHS R01 AI064768
6 · The paper itself

Abstract

Tuberculosis remains a global health emergency that calls for treatment regimens directed at new targets. Here we explored lipoamide dehydrogenase (Lpd), a metabolic and detoxifying enzyme in Mycobacterium tuberculosis (Mtb) whose deletion drastically impairs Mtb's ability to establish infection in the mouse. Upon screening more than 1.6 million compounds, we identified N-methylpyridine 3-sulfonamides as potent and species-selective inhibitors of Mtb Lpd affording >1000-fold selectivity versus the human homologue. The sulfonamides demonstrated low nanomolar affinity and bound at the lipoamide channel in an Lpd-inhibitor cocrystal. Their selectivity could be attributed, at least partially, to hydrogen bonding of the sulfonamide amide oxygen with the species variant Arg93 in the lipoamide channel. Although potent and selective, the sulfonamides did not enter mycobacteria, as determined by their inability to accumulate in Mtb to effective levels or to produce changes in intracellular metabolites. This work demonstrates that high potency and selectivity can be achieved at the lipoamide-binding site of Mtb Lpd, a site different from the NAD⁺/NADH pocket targeted by previously reported species-selective triazaspirodimethoxybenzoyl inhibitors.

Indexed as

Antitubercular AgentsArginineBacterial ProteinsBenzeneacetamidesBinding SitesBiological TransportCell MembraneCell Membrane PermeabilityDihydrolipoamide DehydrogenaseDrug Evaluation, PreclinicalEnzyme InhibitorsHigh-Throughput Screening AssaysHumansMembrane Transport ModulatorsMicrobial Sensitivity TestsMolecular Conformation2-(2-amino-5-bromo-N-methylpyridine-3-sulfonamido)-N-(4-methoxyphenyl)acetamideAntitubercular AgentsArginineBacterial ProteinsBenzeneacetamidesDihydrolipoamide DehydrogenaseEnzyme InhibitorslipoamideMembrane Transport ModulatorsMutant ProteinsRecombinant ProteinsSmall Molecule LibrariesSulfonamidesThioctic Acid

Identifiers

PMID24251446
PMCPMC3894633
OpenAlexW2065749425

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.