Evidence map›Paper›PMID 24249636›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2014

Genome-wide protein QTL mapping identifies human plasma kallikrein as a post-translational regulator of serum uPAR levels.

Michael A Portelli, Mateusz Siedlinski, Ceri E Stewart, Dirkje S Postma, Maartje A Nieuwenhuis, Judith M Vonk, Peter Nurnberg, Janine Altmuller, Miriam F Moffatt, Andrew J Wardlaw and 4 more

Open access · hybridAbstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Comparative analyses of monocyte memory dynamics from mice to humans.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2023
    Article
  3. Article
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  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Genetics and Genomics of Longitudinal Lung Function Patterns in Individuals with Asthma.American journal of respiratory and critical care medicine · 2016
    Observational
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Soluble urokinase-type plasminogen activator receptor as a measure of treatment response in acute exacerbation of COPD.Jornal brasileiro de pneumologia : publicacao oficial da Sociedade Brasileira de Pneumologia e Tisilogia
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 9 institutions in 5 countries.

Michael A Portelli2Division of Respiratory Medicine, University of Nottingham, Queen's Medical Centre, Nottingham, NG7 2UH, UK. michael.portelli@nottingham.ac.uk.
Mateusz Siedlinski
Ceri E Stewart
Dirkje S Postma
Maartje A Nieuwenhuis
Judith M Vonk
Peter Nurnberg
Janine Altmuller
Miriam F Moffatt
Andrew J Wardlaw
Stuart G Parker
Martin J Connolly
Gerard H Koppelman
Ian Sayers
University Medical Center Groningen · NLQueen's Medical Centre · GBUniversity of Cologne · DEAuckland University of Technology · NZImperial College London · GBInstitute for Asthma and Allergy · USUniversity of Leicester · GBUniversity of Nottingham · GBUniversity of Sheffield · GB

Funding

Wellcome Trust 097117
6 · The paper itself

Abstract

The soluble cleaved urokinase plasminogen activator receptor (scuPAR) is a circulating protein detected in multiple diseases, including various cancers, cardiovascular disease, and kidney disease, where elevated levels of scuPAR have been associated with worsening prognosis and increased disease aggressiveness. We aimed to identify novel genetic and biomolecular mechanisms regulating scuPAR levels. Elevated serum scuPAR levels were identified in asthma (n=514) and chronic obstructive pulmonary disease (COPD; n=219) cohorts when compared to controls (n=96). In these cohorts, a genome-wide association study of serum scuPAR levels identified a human plasma kallikrein gene (KLKB1) promoter polymorphism (rs4253238) associated with serum scuPAR levels in a control/asthma population (P=1.17 × 10(-7)), which was also observed in a COPD population (combined P=5.04 × 10(-12)). Using a fluorescent assay, we demonstrated that serum KLKB1 enzymatic activity was driven by rs4253238 and is inverse to scuPAR levels. Biochemical analysis identified that KLKB1 cleaves scuPAR and negates scuPAR's effects on primary human bronchial epithelial cells (HBECs) in vitro. Chymotrypsin was used as a proproteolytic control, while basal HBECs were used as a control to define scuPAR-driven effects. In summary, we reveal a novel post-translational regulatory mechanism for scuPAR using a hypothesis-free approach with implications for multiple human diseases.

Indexed as

AsthmaBinding SitesBlotting, WesternCells, CulturedGenome-Wide Association StudyHaplotypesHumansLinkage DisequilibriumPlasma KallikreinPolymerase Chain ReactionPolymorphism, Single NucleotidePulmonary Disease, Chronic ObstructiveReceptors, Urokinase Plasminogen ActivatorRNA, MessengerPlasma KallikreinReceptors, Urokinase Plasminogen ActivatorRNA, Messengercellular proliferation and wound repairGWASHBECsproteolysisrespiratory disease

Identifiers

PMID24249636
PMCPMC3898658
OpenAlexW1990051625

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.