Evidence map›Paper›PMID 24247825›Full record

ArticleMolecular systems biology2013

Metabolic reconstruction identifies strain-specific regulation of virulence in Toxoplasma gondii.

Carl Song, Melissa A Chiasson, Nirvana Nursimulu, Stacy S Hung, James Wasmuth, Michael E Grigg, John Parkinson

Abstract read
In one paragraph

Article in Molecular systems biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Microbial genomics · 2021
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Vitamin and cofactor acquisition in apicomplexans: SynthesisThe Journal of biological chemistry · 2020
    Review
  11. Review
  12. A Genome-Scale Metabolic Reconstruction ofFrontiers in genetics · 2018
    Article
  13. Metabolic interactions betweenF1000Research · 2018
    Review
  14. Lessons from the genomes and transcriptomes of filarial nematodes.Molecular and biochemical parasitology · 2017
    Review
  15. Genomics of apicomplexan parasites.Critical reviews in biochemistry and molecular biology · 2017
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Carl Song1] Program in Molecular Structure and Function, The Hospital for Sick Children, Toronto, Ontario, Canada [2] Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Melissa A Chiasson
Nirvana Nursimulu
Stacy S Hung
James Wasmuth
Michael E Grigg
John Parkinson

Funding

Toxoplasma Population GeneticsZIAAI001018 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI GRIGG, MICHAEL · 2009 to 2025
$11.3M
Canadian Institutes of Health Research MOP #84556Intramural NIH HHS
6 · The paper itself

Abstract

Increasingly, metabolic potential is proving to be a critical determinant governing a pathogen's virulence as well as its capacity to expand its host range. To understand the potential contribution of metabolism to strain-specific infectivity differences, we present a constraint-based metabolic model of the opportunistic parasite, Toxoplasma gondii. Dominated by three clonal strains (Type I, II, and III demonstrating distinct virulence profiles), T. gondii exhibits a remarkably broad host range. Integrating functional genomic data, our model (which we term as iCS382) reveals that observed strain-specific differences in growth rates are driven by altered capacities for energy production. We further predict strain-specific differences in drug susceptibilities and validate one of these predictions in a drug-based assay, with a Type I strain demonstrating resistance to inhibitors that are effective against a Type II strain. We propose that these observed differences reflect an evolutionary strategy that allows the parasite to extend its host range, as well as result in a subsequent partitioning into discrete strains that display altered virulence profiles across different hosts, different organs, and even cell types.

Indexed as

Gene Expression RegulationMetabolic Networks and PathwaysAntiprotozoal AgentsDiphosphonatesDrug ResistanceFibroblastsHost-Parasite InteractionsHost SpecificityHumansMetabolic EngineeringModels, GeneticQuinolinesSpecies SpecificityToxoplasmaVirulenceAntiprotozoal AgentsDiphosphonatesQuinolines

Identifiers

PMID24247825
PMCPMC4039375

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.