ArticlePeerJ2013
BioNames: linking taxonomy, texts, and trees.
Article in PeerJ, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
18 citing papers in PubMed.
- Wikidata for botanists: benefits of collaborating and sharing Linked Open Data.Annals of botany · 2025Article
- The ELIXIR Biodiversity Community: Understanding short- and long-term changes in biodiversity.F1000Research · 2023Article
- Ten years and a million links: building a global taxonomic library connecting persistent identifiers for names, publications and people.Biodiversity data journal · 2023Article
- Wikidata and the bibliography of life.PeerJ · 2022Article
- Building of an Internal Transcribed Spacer (ITS) Gene Dataset to Support the Italian Health Service in Mushroom Identification.Foods (Basel, Switzerland) · 2021Article
- Ozymandias: a biodiversity knowledge graph.PeerJ · 2019Article
- Article
- Liberating links between datasets using lightweight data publishing: an example using plant names and the taxonomic literature.Biodiversity data journal · 2018Article
- 20 GB in 10 minutes: a case for linking major biodiversity databases using an open socio-technical infrastructure and a pragmatic, cross-institutional collaboration.PeerJ. Computer science · 2018Article
- Automated assembly of a reference taxonomy for phylogenetic data synthesis.Biodiversity data journal · 2017Article
- Microbiome Changes during Tuberculosis and Antituberculous Therapy.Clinical microbiology reviews · 2016Review
- DNA barcoding and taxonomy: dark taxa and dark texts.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016Review
- Scaling up discovery of hidden diversity in fungi: impacts of barcoding approaches.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016Review
- Visualising Geophylogenies in Web Maps Using GeoJSON.PLoS currents · 2015Article
- Utilizing online resources for taxonomy: a cybercatalog of Afrotropical apiocerid flies (Insecta: Diptera: Apioceridae).Biodiversity data journal · 2015Article
- Article
- Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.Database : the journal of biological databases and curation · 2014Article
- Contextual cross-referencing of species names for fiddler crabs (genus Uca): an experiment in cyber-taxonomy.PloS one · 2014Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
1 author.
Funding
No grant is acknowledged in the PubMed record.
Abstract
BioNames is a web database of taxonomic names for animals, linked to the primary literature and, wherever possible, to phylogenetic trees. It aims to provide a taxonomic "dashboard" where at a glance we can see a summary of the taxonomic and phylogenetic information we have for a given taxon and hence provide a quick answer to the basic question "what is this taxon?" BioNames combines classifications from the Global Biodiversity Information Facility (GBIF) and GenBank, images from the Encyclopedia of Life (EOL), animal names from the Index of Organism Names (ION), and bibliographic data from multiple sources including the Biodiversity Heritage Library (BHL) and CrossRef. The user interface includes display of full text articles, interactive timelines of taxonomic publications, and zoomable phylogenies. It is available at http://bionames.org.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.