Evidence map›Paper›PMID 24244489›Full record

ArticlePloS one2013

A common variant in the SIAH2 locus is associated with estrogen receptor-positive breast cancer in the Chinese Han population.

Bo Zhang, Yang Li, Xiaodong Zheng, Xianbo Zuo, Fusheng Zhou, Bo Liang, Jun Zhu, Pan Li, Yantao Ding, Zhonglian Huang and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  4. Dysregulation of ubiquitin ligases in cancer.Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy · 2015
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Bo ZhangDepartment of Oncology, No. 2 Hospital, Anhui Medical University, Hefei, Anhui, China ; School of Life Sciences, Anhui Medical University, Hefei, Anhui, China.
Yang Li
Xiaodong Zheng
Xianbo Zuo
Fusheng Zhou
Bo Liang
Jun Zhu
Pan Li
Yantao Ding
Zhonglian Huang
Benzhong Wang
Zhendong Chen
Anhui Medical University · CNMinistry of Education of the People's Republic of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGenome-wide association studies (GWAS) have identified many loci associated with breast cancer risk. These studies have primarily been conducted in populations of European descent.

objectiveTo determine whether previously reported susceptibility loci in other ethnic groups are also risk factors for breast cancer in a Chinese population.

methodWe genotyped 21 previously reported single nucleotide polymorphisms (SNPs) within a female Chinese cohort of 1203 breast cancer cases and 2525 healthy controls using the Sequenom iPlex platform. Fourteen SNPs passed the quality control test. These SNPs were subjected to statistical analysis for the entire cohort and were further analyzed for estrogen receptor (ER) status. The associations of the SNPs with disease susceptibility were assessed using logistic regression, adjusting for age. The Bonferroni correction was used to conservatively account for multiple testing, and the threshold for statistical significance was P<3.57×10(-3) (0.05/14).

resultAlthough none of the SNPs showed an overall association with breast cancer, an analysis of the ER status of the breast cancer patients revealed that the SIAH2 locus (rs6788895; P = 5.73×10(-4), odds ratio [OR] = 0.81) is associated with ER-positive breast cancer.

conclusionA common variant in the SIAH2 locus is associated with ER-positive breast cancer in the Chinese Han population. The replication of published GWAS results in other ethnic groups provides important information regarding the genetic etiology of breast cancer.

Indexed as

Genetic LociGenetic VariationAdultAsian PeopleBreast NeoplasmsCase-Control StudiesChinaFemaleGenetic Predisposition to DiseaseHumansMiddle AgedNeoplasm StagingNuclear ProteinsPolymorphism, Single NucleotideReceptors, EstrogenSeven in Absentia ProteinsNuclear ProteinsReceptors, EstrogenSeven in Absentia ProteinsUbiquitin-Protein Ligases

Identifiers

PMID24244489
PMCPMC3823686
OpenAlexW2094746103

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.