Evidence map›Paper›PMID 24244461›Full record

ArticlePloS one2013

KSRP modulation of GAP-43 mRNA stability restricts axonal outgrowth in embryonic hippocampal neurons.

Clark W Bird, Amy S Gardiner, Federico Bolognani, Daniel C Tanner, Ching-Yi Chen, Wei-Jye Lin, Soonmoon Yoo, Jeffery L Twiss, Nora Perrone-Bizzozero

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Axonal mRNA localization and translation: local events with broad roles.Cellular and molecular life sciences : CMLS · 2021
    Review
  9. Article
  10. Article
  11. Emerging Roles for 3' UTRs in Neurons.International journal of molecular sciences · 2020
    Review
  12. Review
  13. Article
  14. Review
  15. Expanding Axonal Transcriptome Brings New Functions for Axonally Synthesized Proteins in Health and Disease.The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry · 2018
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Clark W BirdDepartment of Neurosciences, University of New Mexico School of Medicine, Albuquerque, New Mexico, United Sates of America.
Amy S Gardiner
Federico Bolognani
Daniel C Tanner
Ching-Yi Chen
Wei-Jye Lin
Soonmoon Yoo
Jeffery L Twiss
Nora Perrone-Bizzozero
University of New Mexico · USUniversity of Alabama at Birmingham · USAlfred I. duPont Hospital for Children · USUniversity of South Carolina · US

Funding

Center for Pediatric ResearchP20GM103464 · NIGMS · NEMOURS CHILDREN'S HOSPITAL, DELAWARE · PI SHAFFER, THOMAS H · 2012 to 2014
$5.6M
Translation during Nerve RegenerationR01NS041596 · NINDS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI TWISS, JEFFERY L · 2001 to 2018
$4.0M
Mechanisms of Post-Transcriptional Control of Neuronal mRNAsR01NS030255 · NINDS · UNIVERSITY OF NEW MEXICO · PI PERRONE-BIZZOZERO, NORA IRMA · 1997 to 2011
$2.8M
NIGMS NIH HHS P20 GM103464NIGMS NIH HHS P20GM103464NINDS NIH HHS 5R01NS030255NINDS NIH HHS R01 NS030255NINDS NIH HHS R01 NS041596NINDS NIH HHS R01NS041596
6 · The paper itself

Abstract

The KH-type splicing regulatory protein (KSRP) promotes the decay of AU-rich element (ARE)-containing mRNAs. Although KSRP is expressed in the nervous system, very little is known about its role in neurons. In this study, we examined whether KSRP regulates the stability of the ARE-containing GAP-43 mRNA. We found that KSRP destabilizes this mRNA by binding to its ARE, a process that requires the presence of its fourth KH domain (KH4). Furthermore, KSRP competed with the stabilizing factor HuD for binding to these sequences. We also examined the functional consequences of KSRP overexpression and knockdown on the differentiation of primary hippocampal neurons in culture. Overexpression of full length KSRP or KSRP without its nuclear localization signal hindered axonal outgrowth in these cultures, while overexpression of a mutant protein without the KH4 domain that has less affinity for binding to GAP-43's ARE had no effect. In contrast, depletion of KSRP led to a rise in GAP-43 mRNA levels and a dramatic increase in axonal length, both in KSRP shRNA transfected cells and neurons cultured from Ksrp(+/-) and Ksrp(-/-) embryos. Finally we found that overexpression of GAP-43 rescued the axonal outgrowth deficits seen with KSRP overexpression, but only when cells were transfected with GAP-43 constructs containing 3' UTR sequences targeting the transport of this mRNA to axons. Together, our results suggest that KSRP is an important regulator of mRNA stability and axonal length that works in direct opposition to HuD to regulate the levels of GAP-43 and other ARE-containing neuronal mRNAs.

Indexed as

RNA StabilityAnimalsAxonsCells, CulturedGAP-43 ProteinGene ExpressionGene Expression Regulation, DevelopmentalGene Knockdown TechniquesHippocampusMiceProtein BindingPyramidal CellsRatsRNA-Binding ProteinsRNA, MessengerTrans-ActivatorsGAP-43 ProteinKHSRP protein, humanRNA-Binding ProteinsRNA, MessengerTrans-Activators

Identifiers

PMID24244461
PMCPMC3828348
OpenAlexW2016701810

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.