Evidence map›Paper›PMID 24244204›Full record

ArticlePLoS genetics2013

A new role for the GARP complex in microRNA-mediated gene regulation.

Alejandro Vasquez-Rifo, Gabriel D Bossé, Evelyne L Rondeau, Guillaume Jannot, Alexandra Dallaire, Martin J Simard

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Alejandro Vasquez-RifoLaval University Cancer Research Center, Hôtel-Dieu de Québec (Oncology-Centre Hospitalier Universitaire de Québec), Québec City, Québec, Canada.
Gabriel D Bossé
Evelyne L Rondeau
Guillaume Jannot
Alexandra Dallaire
Martin J Simard
Centre hospitalier universitaire de Québec · CAHôtel-Dieu de Québec · CAUniversité Laval · CA

Funding

Canadian Institutes of Health Research MOP-81186
6 · The paper itself

Abstract

Many core components of the microRNA pathway have been elucidated and knowledge of their mechanisms of action actively progresses. In contrast, factors with modulatory roles on the pathway are just starting to become known and understood. Using a genetic screen in Caenorhabditis elegans, we identify a component of the GARP (Golgi Associated Retrograde Protein) complex, vps-52, as a novel genetic interactor of the microRNA pathway. The loss of vps-52 in distinct sensitized genetic backgrounds induces the enhancement of defective microRNA-mediated gene silencing. It synergizes with the core microRNA components, alg-1 Argonaute and ain-1 (GW182), in enhancing seam cell defects and exacerbates the gene silencing defects of the let-7 family and lsy-6 microRNAs in the regulation of seam cell, vulva and ASEL neuron development. Underpinning the observed genetic interactions, we found that VPS-52 impinges on the abundance of the GW182 proteins as well as the levels of microRNAs including the let-7 family. Altogether, we demonstrate that GARP complex fulfills a positive modulatory role on microRNA function and postulate that acting through GARP, vps-52 participates in a membrane-related process of the microRNA pathway.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsFemaleGene Expression Regulation, DevelopmentalGene SilencingGolgi ApparatusMicroRNAsRNA-Binding ProteinsRNA InterferenceVesicular Transport ProteinsAIN-1 protein, C elegansALG-1 protein, C elegansCaenorhabditis elegans ProteinsCarrier Proteinslet-7 microRNA, C elegansMicroRNAsRNA-Binding ProteinsVesicular Transport Proteins

Identifiers

PMID24244204
PMCPMC3820791
OpenAlexW1997978994

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.