Evidence map›Paper›PMID 24244008›Full record

ArticleJournal of bacteriology2014

Transcriptional analysis of the Streptococcus pyogenes salivaricin locus.

Phanramphoei Namprachan-Frantz, Hannah M Rowe, Donna L Runft, Melody N Neely

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification ofFrontiers in microbiology · 2020
    Article
  4. Article
  5. Article
  6. Quorum sensing in group A Streptococcus.Frontiers in cellular and infection microbiology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Phanramphoei Namprachan-FrantzDepartment of Immunology and Microbiology, Wayne State University School of Medicine, Detroit, Michigan, USA.
Hannah M Rowe
Donna L Runft
Melody N Neely
Wayne State University · US

Funding

Analysis of the virulence mechanism of a lantibiotic locusR21AI078147 · NIAID · WAYNE STATE UNIVERSITY · PI NEELY, MELODY NEUHART · 2009 to 2010
$403k
NIAID NIH HHS AI078147NIAID NIH HHS R21 AI078147
6 · The paper itself

Abstract

The sal lantibiotic locus plays an important role in the virulence of Streptococcus pyogenes. Our transcriptional analysis of the sal locus provides new information on the complex regulation of this operon. Transcription of the operon is regulated by a promoter upstream of the operon and by a second internal promoter upstream of the salKRZ genes. Here we identify the location of the internal promoter and provide information on how this promoter is autoregulated by proteins within the locus. We determined by primer extension that the salKR promoter is located within the salY gene and identified several regulatory regions important for expression. The higher activity of the promoter in a salKR deletion strain indicates a role in repression by the SalR response regulator. Further, this promoter had higher activity in a salA deletion strain, implicating corepression or a signaling role for the SalA peptide. Finally, we demonstrate that this promoter can be controlled by host factors. Analysis of transcriptional regulation of this locus provides a better understanding of the function of the sal locus in S. pyogenes pathogenesis.

Indexed as

Bacterial ProteinsGene Expression Regulation, BacterialHumansPromoter Regions, GeneticSerumSignal TransductionStreptococcus pyogenesTranscription, GeneticVirulenceBacterial Proteinssalivaricin A

Identifiers

PMID24244008
PMCPMC3911159
OpenAlexW2009766369

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.