Evidence map›Paper›PMID 24243732›Full record

ArticleThe Journal of general virology2014

Direct visualization of hepatitis C virus-infected Huh7.5 cells with a high titre of infectious chimeric JFH1-EGFP reporter virus in three-dimensional Matrigel cell cultures.

Shuanghu Liu, Ren Chen, Curt H Hagedorn

Abstract read
In one paragraph

Article in The Journal of general virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Choosing a cellular model to study SARS-CoV-2.Frontiers in cellular and infection microbiology · 2022
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Engineered Livers for Infectious Diseases.Cellular and molecular gastroenterology and hepatology · 2018
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Shuanghu LiuDepartment of Medicine, School of Medicine, University of Utah, Salt Lake City, UT 84132, USA.
Ren ChenDepartment of Medicine, School of Medicine, University of Utah, Salt Lake City, UT 84132, USA.
Curt H HagedornCentral Arkansas Veterans Healthcare System and University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
University of Utah · USUniversity of Arkansas for Medical Sciences · US

Funding

DISRUPTION OF CELL CYCLE GENES IN BREAST CANCERR01CA063640 · NCI · UNIVERSITY OF UTAH · PI HAGEDORN, CURT H. · 1995 to 2008
$1.6M
DISRUPTION OF CELL CYCLE GENES IN BREAST CANCERR55CA063640 · NCI · EMORY UNIVERSITY · PI HAGEDORN, CURT H · 1994 to 1994
–
NCI NIH HHS CA63640NCI NIH HHS R01 CA063640
6 · The paper itself

Abstract

Identification of the hepatitis C virus (HCV) JFH1 isolate enabled the development of infectious HCV cell culture systems. However, the relatively low virus titres and instability of some chimeric JFH1 reporter viruses restricts some uses of this system. We describe a higher-titre JFH1-EGFP reporter virus where the NS5A V3 region was replaced with the EGFP gene and adapted by serial passage in Huh7.5 cells. Six adaptive mutants were identified: one each in E2, P7 and NS4B, plus three in the NS5A region. These adaptive mutants increased the reporter virus titres to 1×10(6) immunofluorescent focus-forming units ml(-1), which is the highest titre of JFH1-EGFP reporter virus reported to our knowledge. This chimeric virus did not lose EGFP expression following 40 days of passage and it can be used to test the activity of HCV antivirals by measuring EGFP fluorescence in 96-well plates. Moreover, this reporter virus allows living infected Huh7.5 cells in Matrigel three-dimensional (3D) cultures to be visualized and produces infectious viral particles in these 3D cultures. The chimeric NS5A-EGFP infectious JFH1 reporter virus described should enable new studies of the HCV life cycle in 3D cell cultures and will be useful in identifying antivirals that interfere with HCV release or entry.

Indexed as

Cell Culture TechniquesCell LineCollagenDrug CombinationsGenes, ReporterGreen Fluorescent ProteinsHepacivirusHepatocytesHumansLamininMolecular Sequence DataProteoglycansRecombinant Fusion ProteinsRNA-Dependent RNA PolymeraseRNA, ViralSequence Analysis, DNACollagenDrug Combinationsenhanced green fluorescent proteinGreen Fluorescent ProteinsLamininmatrigelNS-5 protein, hepatitis C virusProteoglycansRecombinant Fusion ProteinsRNA-Dependent RNA PolymeraseRNA, ViralViral Nonstructural Proteins

Identifiers

PMID24243732
PMCPMC3917068
OpenAlexW2062256727

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.