Evidence map›Paper›PMID 24240815›Full record

ArticleScientific reports2013

Defining the expression hierarchy of latent T-cell epitopes in Epstein-Barr virus infection with TCR-like antibodies.

Adrian Chong Nyi Sim, Chien Tei Too, Min Zin Oo, Junyun Lai, Michelle Yating Eio, Zhenying Song, Nalini Srinivasan, Diane Ai Lin Tan, Shyue Wei Pang, Shu Uin Gan and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

  1. Dual role of the peptide-loading complex as proofreader and limiter of MHC-I presentation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  2. Article
  3. SARS-CoV-2 accessory proteins ORF7a and ORF3a use distinct mechanisms to down-regulate MHC-I surface expression.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. Emerging new therapeutic antibody derivatives for cancer treatment.Signal transduction and targeted therapy · 2022
    Review
  6. Review
  7. Article
  8. Article
  9. Targeting the MHC Ligandome by Use of TCR-Like Antibodies.Antibodies (Basel, Switzerland) · 2019
    Review
  10. Review
  11. Utilizing TAPBPR to promote exogenous peptide loading onto cell surface MHC I molecules.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Adrian Chong Nyi Sim1] Immunology Program, Department of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117456, Singapore [2] NUS Graduate School of Integrative Sciences and Engineering (NGS), National University of Singapore, Singapore 117456, Singapore [3].
Chien Tei Too
Min Zin Oo
Junyun Lai
Michelle Yating Eio
Zhenying Song
Nalini Srinivasan
Diane Ai Lin Tan
Shyue Wei Pang
Shu Uin Gan
Kok Onn Lee
Thomas Kwok Seng Loh
Jianzhu Chen
Soh Ha Chan
Paul Anthony MacAry
National University of Singapore · SGNational University Hospital · SGDSO National Laboratories · SGSingapore-MIT Alliance for Research and Technology · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epstein-Barr virus (EBV) is a gamma herpesvirus that causes a life-long latent infection in human hosts. The latent gene products LMP1, LMP2A and EBNA1 are expressed by EBV-associated tumors and peptide epitopes derived from these can be targeted by CD8 Cytotoxic T-Lymphocyte (CTL) lines. Whilst CTL-based methodologies can be utilized to infer the presence of specific latent epitopes, they do not allow a direct visualization or quantitation of these epitopes. Here, we describe the characterization of three TCR-like monoclonal antibodies (mAbs) targeting the latent epitopes LMP1(125-133), LMP2A(426-434) or EBNA1(562-570) in association with HLA-A0201. These are employed to map the expression hierarchy of endogenously generated EBV epitopes. The dominance of EBNA1(562-570) in association with HLA-A0201 was consistently observed in cell lines and EBV-associated tumor biopsies. These data highlight the discordance between MHC-epitope density and frequencies of associated CTL with implications for cell-based immunotherapies and/or vaccines for EBV-associated disease.

Indexed as

AnimalsAntibodies, MonoclonalAntigens, ViralCD8-Positive T-LymphocytesCell Line, TumorEpitopes, T-LymphocyteEpstein-Barr Virus InfectionsEpstein-Barr Virus Nuclear AntigensHerpesvirus 4, HumanHLA-A2 AntigenHumansMiceMice, Inbred BALB CMice, Inbred NODMice, SCIDReceptors, Antigen, T-CellAntibodies, MonoclonalAntigens, ViralEBV-associated membrane antigen, Epstein-Barr virusEBV-encoded nuclear antigen 1Epitopes, T-LymphocyteEpstein-Barr Virus Nuclear AntigensHLA-A*02:01 antigenHLA-A2 AntigenReceptors, Antigen, T-CellViral Matrix Proteins

Identifiers

PMID24240815
PMCPMC3831236
OpenAlexW2162175306

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.