Evidence map›Paper›PMID 24240096›Full record

ArticleThe Journal of biological chemistry2013

Interaction of Bcl-2 with the autophagy-related GABAA receptor-associated protein (GABARAP): biophysical characterization and functional implications.

Peixiang Ma, Melanie Schwarten, Lars Schneider, Alexandra Boeske, Nadine Henke, Dmitrij Lisak, Stephan Weber, Jeannine Mohrlüder, Matthias Stoldt, Birgit Strodel and 4 more

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Article
  3. BCL-2 and BCL-xL in Cancer: Regulation, Function, and Therapeutic Targeting.International journal of molecular sciences · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Stapled Peptide Inhibitors of Autophagy Adapter LC3B.Chembiochem : a European journal of chemical biology · 2020
    Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Peixiang MaFrom the Institute of Complex Systems (ICS-6: Structural Biochemistry), Forschungszentrum Jülich, 52425 Jülich and.
Melanie Schwarten
Lars Schneider
Alexandra Boeske
Nadine Henke
Dmitrij Lisak
Stephan Weber
Jeannine Mohrlüder
Matthias Stoldt
Birgit Strodel
Axel Methner
Silke Hoffmann
Oliver H Weiergräber
Dieter Willbold

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Apoptosis and autophagy are fundamental homeostatic processes in eukaryotic organisms fulfilling essential roles in development and adaptation. Recently, the anti-apoptotic factor Bcl-2 has been reported to also inhibit autophagy, thus establishing a potential link between these pathways, but the mechanistic details are only beginning to emerge. Here we show that Bcl-2 directly binds to the phagophore-associated protein GABARAP. NMR experiments revealed that the interaction critically depends on a three-residue segment (EWD) of Bcl-2 adjacent to the BH4 region, which is anchored to one of the two hydrophobic pockets on the GABARAP molecule. This is at variance with the majority of GABARAP interaction partners identified previously, which occupy both hydrophobic pockets simultaneously. Bcl-2 affinity could also be detected for GEC1, but not for other mammalian Atg8 homologs. Finally, we provide evidence that overexpression of Bcl-2 inhibits lipidation of GABARAP, a key step in autophagosome formation, possibly via competition with the lipid conjugation machinery. These results support the regulatory role of Bcl-2 in autophagy and define GABARAP as a novel interaction partner involved in this intricate connection.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid MotifsAnimalsApoptosisApoptosis Regulatory ProteinsAutophagyCell Line, TransformedCytoskeletal ProteinsHumansHydrophobic and Hydrophilic InteractionsLipoylationMembrane ProteinsMiceMicrotubule-Associated ProteinsNuclear Magnetic Resonance, BiomolecularProtein BindingAdaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsBcl2 protein, mouseCytoskeletal ProteinsGABARAP protein, humanGABARAP protein, mouseGABARAP protein, ratMembrane ProteinsMicrotubule-Associated ProteinsProto-Oncogene Proteins c-bcl-2ApoptosisAutophagyBcl-2GABARAPLC3LipidationNMRProtein-Protein Interactions

Identifiers

PMID24240096
PMCPMC3873574

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.