Evidence map›Paper›PMID 24236175›Full record

ArticlePloS one2013

Characterization of the vaginal microbiota among sexual risk behavior groups of women with bacterial vaginosis.

Christina A Muzny, Imran R Sunesara, Ranjit Kumar, Leandro A Mena, Michael E Griswold, David H Martin, Elliot J Lefkowitz, Jane R Schwebke, Edwin Swiatlo

Erratum issued 2 registry-linked trialsAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to 2 registered trials, which are not on this map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01043081 completednot on this map

Prevalence Rates of Sexually Transmitted Infections and Sexual Risk Behaviors Among African American Women Who Have Sex With Women

TypeobservationalSponsorUniversity of Mississippi Medical CenterRan2009 to 2012Enrolled300ConditionsSexually Transmitted Infections, HIV Infections
NCT02272231 completednot on this mapstarted 2014, after this paper: background citation

Pathogenesis of Bacterial Vaginosis in Women Who Have Sex With Women

TypeobservationalSponsorUniversity of Alabama at BirminghamRan2014 to 2019Enrolled42ConditionsVaginosis, Bacterial
3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

  • Erratum issued
    Swiatlo, Edwin [added]
5 · Who and what money

Authors and funding

9 authors.

Christina A MuznyDivision of Infectious Diseases, University of Alabama at Birmingham, Birmingham, Alabama, United States of America.
Imran R Sunesara
Ranjit Kumar
Leandro A Mena
Michael E Griswold
David H Martin
Elliot J Lefkowitz
Jane R Schwebke
Edwin Swiatlo

Funding

UAB Center for Clinical and Translational Science (CCTS) UL1UL1TR000165 · NCATS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KIMBERLY, ROBERT P. · 2012 to 2013
$9.6M
NCATS NIH HHS UL1 TR000165
6 · The paper itself

Abstract

backgroundThe pathogenesis of bacterial vaginosis (BV) remains elusive. BV may be more common among women who have sex with women (WSW). The objective of this study was to use 454 pyrosequencing to investigate the vaginal microbiome of WSW, women who have sex with women and men (WSWM), and women who have sex with men (WSM) with BV to determine if there are differences in organism composition between groups that may inform new hypotheses regarding the pathogenesis of BV.

methodsVaginal swab specimens from eligible women with BV at the Mississippi State Department of Health STD Clinic were used. After DNA extraction, 454 pyrosequencing of PCR-amplified 16S rRNA gene sequences was performed. Sequence data was classified using the Ribosomal Database Program classifer. Complete linkage clustering analysis was performed to compare bacterial community composition among samples. Differences in operational taxonomic units with an abundance of ≥ 2% between risk behavior groups were determined. Alpha and beta diversity were measured using Shannon's Index implemented in QIIME and Unifrac analysis, respectively.

results33 WSW, 35 WSWM, and 44 WSM were included. The vaginal bacterial communities of all women clustered into four taxonomic groups with the dominant taxonomic group in each being Lactobacillus, Lachnospiraceae, Prevotella, and Sneathia. Regarding differences in organism composition between risk behavior groups, the abundance of Atopobium (relative ratio (RR)=0.24; 95%CI 0.11-0.54) and Parvimonas (RR=0.33; 95%CI 0.11-0.93) were significantly lower in WSW than WSM, the abundance of Prevotella was significantly higher in WSW than WSWM (RR=1.77; 95%CI 1.10-2.86), and the abundance of Atopobium (RR=0.41; 95%CI 0.18-0.88) was significantly lower in WSWM than WSM. Overall, WSM had the highest diversity of bacterial taxa.

conclusionThe microbiology of BV among women in different risk behavior groups is heterogeneous. WSM in this study had the highest diversity of bacterial taxa. Additional studies are needed to better understand these differences.

Indexed as

MicrobiotaAdultBacteriaCluster AnalysisCross-Sectional StudiesFemaleHumansMaleMetagenomeMississippiPhylogenyRisk-TakingRNA, Ribosomal, 16SSexual BehaviorVaginaVaginosis, BacterialRNA, Ribosomal, 16S

Identifiers

PMID24236175
PMCPMC3827412

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.