Evidence map›Paper›PMID 24233717›Full record

ArticleScience (New York, N.Y.)2013

Iron(IV)hydroxide pK(a) and the role of thiolate ligation in C-H bond activation by cytochrome P450.

Timothy H Yosca, Jonathan Rittle, Courtney M Krest, Elizabeth L Onderko, Alexey Silakov, Julio C Calixto, Rachel K Behan, Michael T Green

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 152 papers.

0numbers the graph read from it
0cells of the map it votes in
152citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

152 citing papers in PubMed, 326 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Review
  7. Article
  8. Oxidizable amino acids around cytochrome P450 hemes.Journal of inorganic biochemistry · 2026
    Article
  9. Manipulating Terminal Iron-Hydroxide Nucleophilicity through Redox.Journal of the American Chemical Society · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Design and characterization of a tunable open TEJournal of magnetic resonance (San Diego, Calif. : 1997) · 2025
    Article
  14. Article
  15. Intramolecular Oxo Atom Migration to theJournal of the American Chemical Society · 2025
    Article
  16. Article
  17. Article
  18. Stabilization of the Ferryl═Oxoheme Form ofJournal of the American Chemical Society · 2025
    Article
  19. Experimental electronic structures of the FeProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  20. Article

92 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Timothy H YoscaDepartment of Chemistry, Pennsylvania State University, University Park, PA 16802, USA.
Jonathan Rittle
Courtney M Krest
Elizabeth L Onderko
Alexey Silakov
Julio C Calixto
Rachel K Behan
Michael T Green
Pennsylvania State University · US

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Thermodynamic, Electronic, Structural, and Kinetic Characterizations of Cytochrome P450 Compounds I & IIR01GM101390 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI MICHAEL T. GREEN · 2012 to 2026
$3.0M
NIGMS NIH HHS P41 GM103393NIGMS NIH HHS P41GM103393NIGMS NIH HHS R01 GM101390NIGMS NIH HHS R01-GM101390
6 · The paper itself

Abstract

Cytochrome P450 enzymes activate oxygen at heme iron centers to oxidize relatively inert substrate carbon-hydrogen bonds. Cysteine thiolate coordination to iron is posited to increase the pK(a) (where K(a) is the acid dissociation constant) of compound II, an iron(IV)hydroxide complex, correspondingly lowering the one-electron reduction potential of compound I, the active catalytic intermediate, and decreasing the driving force for deleterious auto-oxidation of tyrosine and tryptophan residues in the enzyme's framework. Here, we report on the preparation of an iron(IV)hydroxide complex in a P450 enzyme (CYP158) in ≥90% yield. Using rapid mixing technologies in conjunction with Mössbauer, ultraviolet/visible, and x-ray absorption spectroscopies, we determine a pK(a) value for this compound of 11.9. Marcus theory analysis indicates that this elevated pK(a) results in a >10,000-fold reduction in the rate constant for oxidations of the protein framework, making these processes noncompetitive with substrate oxidation.

Indexed as

CarbonCatalysisCysteineCytochrome P-450 Enzyme SystemEnzyme ActivationHydrogen BondingHydroxidesOxidation-ReductionTryptophanTyrosineCarbonCysteinecysteine thiolateCytochrome P-450 Enzyme Systemhydroxide ionHydroxidesTryptophanTyrosine

Identifiers

PMID24233717
PMCPMC4299822
OpenAlexW2155860547

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.