Evidence map›Paper›PMID 24228069›Full record

ArticleInternational journal of biomedical nanoscience and nanotechnology2013

Protein expression profiles of intestinal epithelial co-cultures: effect of functionalised carbon nanotube exposure.

Xianyin Lai, Bonnie L Blazer-Yost, James W Clack, Sharry L Fears, Somenath Mitra, Susana Addo Ntim, Heather N Ringham, Frank A Witzmann

Abstract read
In one paragraph

Article in International journal of biomedical nanoscience and nanotechnology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Comparison of nanotube-protein corona composition in cell culture media.Small (Weinheim an der Bergstrasse, Germany) · 2013
    Article
  8. Nanoparticle toxicity by the gastrointestinal route: evidence and knowledge gaps.International journal of biomedical nanoscience and nanotechnology · 2013
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xianyin LaiDepartment of Cellular and Integrative Physiology, Indiana University School of Medicine, 1345 West 16th Street, Indianapolis IN 46202, USA, xlai@iupui.edu.
Bonnie L Blazer-Yost
James W Clack
Sharry L Fears
Somenath Mitra
Susana Addo Ntim
Heather N Ringham
Frank A Witzmann

Funding

Nanoparticle Effects on Epithelial Cell Protein Expression and FunctionR01GM085218 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI WITZMANN, FRANK A · 2008 to 2012
$2.1M
Characterization Methodologies & Proteomics to Assess Carbon Nanotube ExposureRC2ES018810 · NIEHS · INDIANA UNIVERSITY INDIANAPOLIS · PI MITRA, SOMENATH, WITZMANN, FRANK A · 2009 to 2012
$1.5M
NIEHS NIH HHS RC2 ES018810NIGMS NIH HHS R01 GM085218
6 · The paper itself

Abstract

To assess the biological effects of low level, water dispersible, functionalised carbon nanotube (f-CNT) exposure in an in vitro model simulating the digestive tract, cellular protein expression was quantified and compared using label-free quantitative mass spectrometry (LFQMS). Co-cultured cells were exposed to well-characterised SWCNT-COOH, MWCNT-COOH, and MWCNT-PVP. The relative expression of 2,282 unique proteins was compared across the dose groups. 428 proteins were found to be differentially expressed. At the high dose, the extent of differential protein expression was CNT-specific and directly related to CNT colloidal stability. Cells responded to low level MWCNT-PVP exposure with three-fold greater differential expression. Bioinformatic analysis indicated significant and f-CNT-specific effects on relevant molecular and cellular functions and canonical pathways, with little overlap across f-CNT type and in the absence of overt toxicity.

Indexed as

carbon nanotubeCNTcolonintestinal cellsin vitrolabel-free quantitationmass spectrometrypoly(4-vinylpyrrolidone)proteomics

Identifiers

PMID24228069
PMCPMC3822612

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.