Evidence map›Paper›PMID 24219834›Full record

ArticlePigment cell & melanoma research2014

An inherited variant in the gene coding for vitamin D-binding protein and survival from cutaneous melanoma: a BioGenoMEL study.

John R Davies, Sinead Field, Juliette Randerson-Moor, Mark Harland, Rajiv Kumar, Gabriella M Anic, Eduardo Nagore, Johan Hansson, Veronica Höiom, Göran Jönsson and 23 more

Open access · hybridAbstract read
In one paragraph

Article in Pigment cell & melanoma research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 2 pooled it
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 2 syntheses or guidelines pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Vitamin D signaling and melanoma: role of vitamin D and its receptors in melanoma progression and management.Laboratory investigation; a journal of technical methods and pathology · 2017
    Review
  11. Review
  12. Article
  13. The Expression Quantitative Trait Loci in Immune Pathways and their Effect on Cutaneous Melanoma Prognosis.Clinical cancer research : an official journal of the American Association for Cancer Research · 2016
    Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 15 institutions in 9 countries.

John R DaviesSection of Epidemiology and Biostatistics, Leeds Institute of Cancer and Pathology, University of Leeds, Leeds, UK.
Sinead Field
Juliette Randerson-Moor
Mark Harland
Rajiv Kumar
Gabriella M Anic
Eduardo Nagore
Johan Hansson
Veronica Höiom
Göran Jönsson
Nelleke A Gruis
Jong Y Park
Jian Guan
P Sivaramakrishna Rachakonda
Judith Wendt
Dace Pjanova
Susana Puig
Dirk Schadendorf
Ichiro Okamoto
Håkan Olsson
Paul Affleck
Zaida García-Casado
Joan Anton Puig-Butille
Alexander J Stratigos
Elizabeth Kodela
Simona Donina
Antje Sucker
Ismail Hosen
Kathleen M Egan
Jennifer H Barrett
Remco van Doorn
D Timothy Bishop
Julia Newton-Bishop
University of Leeds · GBKarolinska Institutet · SEMoffitt Cancer Center · USEssen University Hospital · DEFundación Instituto Valenciano de Oncología · ESGerman Cancer Research Center · DEHeidelberg University · DELatvian Biomedical Research and Study Centre · LVLeiden University · NLMedical University of Vienna · ATAndreas Sygros Hospital · GRHospital Clínic de Barcelona · ESInstituto de Salud Carlos III · ESLund University · SENational and Kapodistrian University of Athens · GR

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI KENNETH Lynn WRIGHT · 1998 to 2026
$93.5M
Genetic Epidermiology of MelanomaR01CA083115 · NCI · UNIVERSITY OF PENNSYLVANIA · PI BISHOP, DAVID TIMOTHY, ELDER, DAVID ERIC · 2001 to 2017
$13.0M
Moffitt Postdoctoral Training Program in Molecular & Genetic EpidemiologyR25CA147832 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI EGAN, KATHLEEN M. · 2010 to 2014
$2.0M
Cancer Research UK 10589Cancer Research UK C37059/A11941Cancer Research UK C588/A10589Cancer Research UK C588/A4994Cancer Research UK C8216/A6129European Research Council 294576NCI NIH HHS CA83115NCI NIH HHS P30 CA076292NCI NIH HHS R01 CA083115NCI NIH HHS R25 CA147832
6 · The paper itself

Abstract

An association between low serum vitamin D levels and poorer melanoma survival has been reported. We have studied inheritance of a polymorphism of the GC gene, rs2282679, coding for the vitamin D-binding protein, which is associated with lower serum levels of vitamin D, in a meta-analysis of 3137 melanoma patients. The aim was to investigate evidence for a causal relationship between vitamin D and outcome (Mendelian randomization). The variant was not associated with reduced overall survival (OS) in the UK cohort, per-allele hazard ratio (HR) for death 1.23 (95% confidence interval (CI) 0.93, 1.64). In the smaller cohorts, HR in OS analysis was 1.07 (95% CI 0.88, 1.3) and for all cohorts combined, HR for OS was 1.09 (95% CI 0.93, 1.29). There was evidence of increased melanoma-specific deaths in the seven cohorts for which these data were available. The lack of unequivocal findings despite the large sample size illustrates the difficulties of implementing Mendelian randomization.

Indexed as

Genetic Predisposition to DiseaseAdolescentAdultAgedAllelesCohort StudiesCutaneous Malignant MelanomaGenetic Association StudiesHaplotypesHumansInheritance PatternsKaplan-Meier EstimateMelanomaMeta-Analysis as TopicMiddle AgedPolymorphism, Single NucleotideVitamin DVitamin D-Binding ProteinGCmelanomamendelian randomizationsurvival analysisvitamin D

Identifiers

PMID24219834
PMCPMC4065372
OpenAlexW1964559769

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.