Evidence map›Paper›PMID 24219635›Full record

ArticleEvolution; international journal of organic evolution2014

Genetic regulatory network motifs constrain adaptation through curvature in the landscape of mutational (co)variance.

Tyler D Hether, Paul A Hohenlohe

Abstract read
In one paragraph

Article in Evolution; international journal of organic evolution, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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  8. Decoupling of evolutionary changes in mRNA and protein levels.bioRxiv : the preprint server for biology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Tyler D HetherDepartment of Biological Sciences and Institute for Bioinformatics and Evolutionary Studies, University of Idaho, Moscow, Idaho, 83844-3051.
Paul A Hohenlohe

Funding

The Evolution of Protein FlexibilityP20RR016448 · NCRR · UNIVERSITY OF IDAHO · PI BROWN, CELESTE J · 2002 to 2011
$19.3M
Genomics Resources Core (GRC)P30GM103324 · NIGMS · UNIVERSITY OF IDAHO · PI SETTLES, MATTHEW · 2013 to 2017
$5.0M
Center for Research on Processes in EvolutionP20GM103397 · NIGMS · UNIVERSITY OF IDAHO · PI FORNEY, LARRY J · 2012 to 2012
$1.9M
NCRR NIH HHS 5P20RR016448NCRR NIH HHS P20 RR016448NIGMS NIH HHS 1P30GM103324NIGMS NIH HHS 8P20GM103397NIGMS NIH HHS P20 GM103397NIGMS NIH HHS P30 GM103324
6 · The paper itself

Abstract

Systems biology is accumulating a wealth of understanding about the structure of genetic regulatory networks, leading to a more complete picture of the complex genotype-phenotype relationship. However, models of multivariate phenotypic evolution based on quantitative genetics have largely not incorporated a network-based view of genetic variation. Here we model a set of two-node, two-phenotype genetic network motifs, covering a full range of regulatory interactions. We find that network interactions result in different patterns of mutational (co)variance at the phenotypic level (the M-matrix), not only across network motifs but also across phenotypic space within single motifs. This effect is due almost entirely to mutational input of additive genetic (co)variance. Variation in M has the effect of stretching and bending phenotypic space with respect to evolvability, analogous to the curvature of space-time under general relativity, and similar mathematical tools may apply in each case. We explored the consequences of curvature in mutational variation by simulating adaptation under divergent selection with gene flow. Both standing genetic variation (the G-matrix) and rate of adaptation are constrained by M, so that G and adaptive trajectories are curved across phenotypic space. Under weak selection the phenotypic mean at migration-selection balance also depends on M.

Indexed as

Adaptation, BiologicalGene Regulatory NetworksAnimalsBiological EvolutionGene FlowModels, GeneticMutationPhenotypeDivergence with gene flowevolutionary systems biologyevolvabilityG-matrixM-matrixquantitative genetics

Identifiers

PMID24219635
PMCPMC3975670

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.