Evidence map›Paper›PMID 24218616›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Structural and functional insights into the regulation mechanism of CK2 by IP6 and the intrinsically disordered protein Nopp140.

Won-Kyu Lee, Sang Hyeon Son, Bong-Suk Jin, Jung-Hyun Na, Soo-Youl Kim, Kook-Han Kim, Eunice Eunkyeong Kim, Yeon Gyu Yu, Hyung Ho Lee

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Article
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  7. Article
  8. Multiple inositol phosphate species enhance stability of active mTOR.bioRxiv : the preprint server for biology · 2024
    Article
  9. Roles of NOLC1 in cancers and viral infection.Journal of cancer research and clinical oncology · 2023
    Review
  10. Article
  11. Review
  12. Article
  13. Signalling Properties of Inositol Polyphosphates.Molecules (Basel, Switzerland) · 2020
    Review
  14. Article
  15. Article
  16. AThe Journal of biological chemistry · 2020
    Article
  17. Review
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Won-Kyu LeeDepartments of Bio and Nano Chemistry and Integrative Biomedical Science and Engineering, Kookmin University, Seoul 136-702, Korea.
Sang Hyeon Son
Bong-Suk Jin
Jung-Hyun Na
Soo-Youl Kim
Kook-Han Kim
Eunice Eunkyeong Kim
Yeon Gyu Yu
Hyung Ho Lee
Korea Institute of Science and Technology · KRKookmin University · KRNational Cancer Center · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein kinase CK2 is a ubiquitous kinase that can phosphorylate hundreds of cellular proteins and plays important roles in cell growth and development. Deregulation of CK2 is related to a variety of human cancers, and CK2 is regarded as a suppressor of apoptosis; therefore, it is a target of anticancer therapy. Nucleolar phosphoprotein 140 (Nopp140), which is an intrinsically disordered protein, interacts with CK2 and inhibits the latter's catalytic activity in vitro. Interestingly, the catalytic activity of CK2 is recovered in the presence of d-myo-inositol 1,2,3,4,5,6-hexakisphosphate (IP6). IP6 is widely distributed in animal cells, but the molecular mechanisms that govern its cellular functions in animal cells have not been completely elucidated. In this study, the crystal structure of CK2 in complex with IP6 showed that the lysine-rich cluster of CK2 plays an important role in binding to IP6. The biochemical experiments revealed that a Nopp140 fragment (residues 568-596) and IP6 competitively bind to the catalytic subunit of CK2 (CK2α), and phospho-Ser574 of Nopp140 significantly enhances its interaction with CK2α. Substitutions of K74E, K76E, and K77E in CK2α significantly reduced the interactions of CK2α with both IP6 and the Nopp140-derived peptide. Our study gives an insight into the regulation of CK2. In particular, our work suggests that CK2 activity is inhibited by Nopp140 and reactivated by IP6 by competitive binding at the substrate recognition site of CK2.

Indexed as

Models, MolecularAmino Acid SubstitutionCasein Kinase IICrystallizationGene Expression RegulationHumansMacromolecular SubstancesNuclear ProteinsPhosphoproteinsPhytic AcidProtein ConformationX-Ray DiffractionCasein Kinase IIMacromolecular SubstancesNOLC1 protein, humanNuclear ProteinsPhosphoproteinsPhytic AcidIDPinositol hexakisphosphatephosphorylation

Identifiers

PMID24218616
PMCPMC3845154
OpenAlexW2158344198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.