Evidence map›Paper›PMID 24218579›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

FtsK-dependent XerCD-dif recombination unlinks replication catenanes in a stepwise manner.

Koya Shimokawa, Kai Ishihara, Ian Grainge, David J Sherratt, Mariel Vazquez

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Plasticity in the cell division processes of obligate intracellular bacteria.Frontiers in cellular and infection microbiology · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. DNA-Topology Simplification by Topoisomerases.Molecules (Basel, Switzerland) · 2021
    Review
  10. Article
  11. Functional Analysis of theAntibiotics (Basel, Switzerland) · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 4 countries.

Koya ShimokawaDepartment of Mathematics, Saitama University, Saitama 380-8570, Japan.
Kai Ishihara
Ian Grainge
David J Sherratt
Mariel Vazquez
Saitama University · JPSan Francisco State University · USUniversity of Newcastle Australia · AUUniversity of Oxford · GBYamaguchi University · JP

Funding

NIAID NIH HHS WT099204AIA
6 · The paper itself

Abstract

In Escherichia coli, complete unlinking of newly replicated sister chromosomes is required to ensure their proper segregation at cell division. Whereas replication links are removed primarily by topoisomerase IV, XerC/XerD-dif site-specific recombination can mediate sister chromosome unlinking in Topoisomerase IV-deficient cells. This reaction is activated at the division septum by the DNA translocase FtsK, which coordinates the last stages of chromosome segregation with cell division. It has been proposed that, after being activated by FtsK, XerC/XerD-dif recombination removes DNA links in a stepwise manner. Here, we provide a mathematically rigorous characterization of this topological mechanism of DNA unlinking. We show that stepwise unlinking is the only possible pathway that strictly reduces the complexity of the substrates at each step. Finally, we propose a topological mechanism for this unlinking reaction.

Indexed as

Models, BiologicalChromosomes, BacterialChromosome SegregationDNA, CatenatedEscherichia coliEscherichia coli ProteinsIntegrasesMembrane ProteinsRecombination, GeneticDNA, CatenatedEscherichia coli ProteinsFtsK protein, E coliIntegrasesMembrane ProteinsXerC protein, E coliXerD protein, E coliband surgeryDNA topologytangle methodtopology simplificationXer recombination

Identifiers

PMID24218579
PMCPMC3876235
OpenAlexW2068737563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.