Evidence map›Paper›PMID 24218059›Full record

ArticlePlanta2014

Functional identification of multiple nucleocytoplasmic trafficking signals in the broad-spectrum resistance protein RPW8.2.

Yan-Yan Huang, Yi Shi, Yang Lei, Yan Li, Jing Fan, Yong-Ju Xu, Xian-Feng Ma, Ji-Qun Zhao, Shunyuan Xiao, Wen-Ming Wang

Abstract readValidation Study
PubMed Publisher
In one paragraph

Article in Planta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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  10. A Novel, Small Cysteine-Rich Effector, RsSCR10 inFrontiers in microbiology · 2021
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  11. The Flower-Infecting FungusFrontiers in plant science · 2021
    Article
  12. Heterologous Expression of Dehydration-InducibleInternational journal of molecular sciences · 2020
    Article
  13. TheGenes · 2019
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  14. Article
  15. miR396-Frontiers in plant science · 2018
    Article
  16. Frontiers in plant science · 2017
    Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Yan-Yan HuangRice Research Institute, Sichuan Agricultural University, Chengdu, 611130, China.
Yi Shi
Yang Lei
Yan Li
Jing Fan
Yong-Ju Xu
Xian-Feng Ma
Ji-Qun Zhao
Shunyuan Xiao
Wen-Ming Wang
Rice Research Institute · CNSichuan Agricultural University · CNInstitute for Bioscience and Biotechnology Research

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear localization signals (NLSs) and nuclear export signals (NESs) are important intramolecular regulatory elements for protein nucleocytoplasmic trafficking. This regulation confers spatial specificity to signal initiation and transduction in eukaryotic cells and thus is fundamental to the viability of all eukaryotic organisms. Here, we developed a simple and rapid method in which activity of putative NLSs or NESs was reported by subcellular localization of two tandem fluorescent proteins in fusion with the respective NLSs or NESs after agroinfiltration-mediated transient expression in leaves of Nicotiana benthamiana (Nb). We further demonstrated that the predicted NES from amino acid residue (aa) 9 to 22 and the NLS from aa91 to 101 in the broad-spectrum disease resistance protein RPW8.2 possess nuclear export and import activity, respectively. Additionally, by testing overlapping fragments covering the full length of RPW8.2, we identified another NLS from aa65 to 74 with strong nuclear import activity and two tandem non-canonical NESs in the C-terminus with strong nuclear export activity. Taken together, our results demonstrated the utility of a simple method to evaluate potential NLSs and NESs in plant cells and suggested that RPW8.2 may be subject to opposing nucleocytoplasmic trafficking forces for its subcellular localization and functional execution.

Indexed as

Nuclear Export SignalsNuclear Localization SignalsSignal TransductionAmino Acid SequenceArabidopsisArabidopsis ProteinsCell NucleusCytoplasmGenes, ReporterMolecular Sequence DataMutationNicotianaPlant LeavesPlants, Genetically ModifiedProtein TransportRecombinant Fusion ProteinsArabidopsis ProteinsNuclear Export SignalsNuclear Localization SignalsRecombinant Fusion ProteinsRPW8.2 protein, Arabidopsis

Identifiers

PMID24218059
OpenAlexW2055375618

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.