Evidence map›Paper›PMID 24217620›Full record

ArticleThe Journal of cell biology2013

The histone demethylase LSD1/KDM1A promotes the DNA damage response.

Nima Mosammaparast, Haeyoung Kim, Benoit Laurent, Yu Zhao, Hui Jun Lim, Mona C Majid, Sebastian Dango, Yuying Luo, Kristina Hempel, Mathew E Sowa and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 132 citations in OpenAlex.

  1. Article
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  3. Review
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  7. Transcription-Replication Conflicts: Unlocking New Frontiers in Cancer.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
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  11. Review
  12. Regulation and function of transposable elements in cancer genomes.Cellular and molecular life sciences : CMLS · 2024
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Nima MosammaparastDepartment of Pathology and Immunology, Division of Laboratory and Genomic Medicine, Washington University in St. Louis, St. Louis, MO 63110.
Haeyoung Kim
Benoit Laurent
Yu Zhao
Hui Jun Lim
Mona C Majid
Sebastian Dango
Yuying Luo
Kristina Hempel
Mathew E Sowa
Steven P Gygi
Hanno Steen
J Wade Harper
Bruce Yankner
Yang Shi
Harvard University · USBoston Children's Hospital · USWashington University in St. Louis · US

Funding

SYNAPTIC MECHANISMS IN HIPPOCAMPAL EPILEPTOGENESISP30HD018655 · NICHD · CHILDREN'S HOSPITAL BOSTON · PI POMEROY, SCOTT LOREN · 1985 to 2015
$26.2M
VASCULAR, PULMONARY AND RENAL INJURYT32HL007627 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI GIMBRONE, MICHAEL A, MITCHELL, RICHARD N · 1985 to 2019
$12.7M
Ubiquitin Mediated Proteolysis and Cell Cycle ControlR01AG011085 · NIA · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI JEFFREY W HARPER · 1993 to 2026
$10.9M
SYSTEMATIC ANALYSIS OF THE DUB PROTEOMER01GM054137 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI HARPER, JEFFREY W · 1996 to 2012
$4.1M
Histone Demethylases and Regulation of Chromatin and Transcription in EukaryotesR01CA118487 · NCI · HARVARD MEDICAL SCHOOL · PI SHI, YANG · 2006 to 2017
$3.6M
Modeling the Aging EpigenomeDP1AG044161 · NIA · HARVARD MEDICAL SCHOOL · PI YANKNER, BRUCE A · 2012 to 2014
$2.5M
Linking histone demethylation and the DNA damage response.K08CA158133 · NCI · WASHINGTON UNIVERSITY · PI MOSAMMAPARAST, NIMA · 2011 to 2015
$806k
NCI NIH HHS CA118487NCI NIH HHS K08 CA158133NCI NIH HHS R01 CA118487NHLBI NIH HHS T32 HL007627NHLBI NIH HHS T32-HL007627NIA NIH HHS AG011085NIA NIH HHS DP1 AG044161NIA NIH HHS R01 AG011085NICHD NIH HHS P30 HD018655NIGMS NIH HHS GM054137NIGMS NIH HHS R01 GM054137
6 · The paper itself

Abstract

Histone demethylation is known to regulate transcription, but its role in other processes is largely unknown. We report a role for the histone demethylase LSD1/KDM1A in the DNA damage response (DDR). We show that LSD1 is recruited directly to sites of DNA damage. H3K4 dimethylation, a major substrate for LSD1, is reduced at sites of DNA damage in an LSD1-dependent manner. The E3 ubiquitin ligase RNF168 physically interacts with LSD1 and we find this interaction to be important for LSD1 recruitment to DNA damage sites. Although loss of LSD1 did not affect the initial formation of pH2A.X foci, 53BP1 and BRCA1 complex recruitment were reduced upon LSD1 knockdown. Mechanistically, this was likely a result of compromised histone ubiquitylation preferentially in late S/G2. Consistent with a role in the DDR, knockdown of LSD1 resulted in moderate hypersensitivity to γ-irradiation and increased homologous recombination. Our findings uncover a direct role for LSD1 in the DDR and place LSD1 downstream of RNF168 in the DDR pathway.

Indexed as

AnimalsBRCA1 ProteinCell Line, TumorDNA Breaks, Double-StrandedDNA DamageDNA MethylationDNA RepairHEK293 CellsHeLa CellsHistone DemethylasesHistonesHumansIntracellular Signaling Peptides and ProteinsMiceRadiation ToleranceRNA InterferenceBRCA1 ProteinBRCA1 protein, humanHistone DemethylasesHistonesIntracellular Signaling Peptides and ProteinsKDM1A protein, humanRNA, Small InterferingRNF168 protein, humanTP53BP1 protein, humanTumor Suppressor p53-Binding Protein 1Ubiquitin-Protein Ligases

Identifiers

PMID24217620
PMCPMC3824007
OpenAlexW2132716486

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.