Evidence map›Paper›PMID 24217250›Full record

ArticleThe Journal of biological chemistry2013

Common polymorphisms in human langerin change specificity for glycan ligands.

Hadar Feinberg, Thomas J W Rowntree, Shawn L W Tan, Kurt Drickamer, William I Weis, Maureen E Taylor

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 55 citations in OpenAlex.

  1. Synthetic Ligands of Myeloid C-Type Lectin Receptors.Chembiochem : a European journal of chemical biology · 2026
    Review
  2. Review
  3. Frontiers in cellular and infection microbiology · 2022
    Review
  4. Review
  5. Article
  6. Analysis and Interpretation of the Impact of Missense Variants in Cancer.International journal of molecular sciences · 2021
    Review
  7. Association of Maternal DNA Methylation and Offspring Birthweight.Reproductive sciences (Thousand Oaks, Calif.) · 2021
    Article
  8. Review
  9. Article
  10. C-Type Lectin Receptors in Host Defense Against Bacterial Pathogens.Frontiers in cellular and infection microbiology · 2020
    Review
  11. Article
  12. Review
  13. Article
  14. Lectins: a primer for histochemists and cell biologists.Histochemistry and cell biology · 2017
    Review
  15. Article
  16. What contributes to an effective mannose recognition domain?Beilstein journal of organic chemistry · 2017
    Review
  17. Sweet complementarity: the functional pairing of glycans with lectins.Cellular and molecular life sciences : CMLS · 2016
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Hadar FeinbergFrom the Department of Life Sciences, Imperial College, London SW7 2AZ, United Kingdom and.
Thomas J W Rowntree
Shawn L W Tan
Kurt Drickamer
William I Weis
Maureen E Taylor
Imperial College London · GBStanford University · US

Funding

Structural Basis of Immune Recognition of Glycosylated AntigensU54GM062116 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SASISEKHARAN, RAM · 2001 to 2010
$80.3M
NIGMS NIH HHS GM62116NIGMS NIH HHS U54 GM062116Wellcome TrustWellcome Trust 093599
6 · The paper itself

Abstract

Langerin, a C-type lectin on Langerhans cells, mediates carbohydrate-dependent uptake of pathogens in the first step of antigen presentation to the adaptive immune system. Langerin binds a diverse range of carbohydrates including high mannose structures, fucosylated blood group antigens, and glycans with terminal 6-sulfated galactose. Mutagenesis and quantitative binding assays indicate that salt bridges between the sulfate group and two lysine residues compensate for the nonoptimal binding of galactose at the primary Ca(2+) site. A commonly occurring single nucleotide polymorphism (SNP) in human langerin results in change of one of these lysine residues, Lys-313, to isoleucine. Glycan array screening reveals that this amino acid change abolishes binding to oligosaccharides with terminal 6SO4-Gal and enhances binding to oligosaccharides with terminal GlcNAc residues. Structural analysis shows that enhanced binding to GlcNAc may result from Ile-313 packing against the N-acetyl group. The K313I polymorphism is tightly linked to another SNP that results in the change N288D, which reduces affinity for glycan ligands by destabilizing the Ca(2+)-binding site. Langerin with Asp-288 and Ile-313 shows no binding to 6SO4-Gal-terminated glycans and increased binding to GlcNAc-terminated structures, but overall decreased binding to glycans. Altered langerin function in individuals with the linked N288D and K313I polymorphisms may affect susceptibility to infection by microorganisms.

Indexed as

Amino Acid SubstitutionPolymorphism, Single NucleotideAntigens, CDBinding SitesCalciumCrystallography, X-RayGenetic Predisposition to DiseaseHumansInfectionsLectins, C-TypeLigandsMannose-Binding LectinsOligosaccharidesProtein BindingProtein Structure, TertiaryAntigens, CDCalciumCD207 protein, humanLectins, C-TypeLigandsMannose-Binding LectinsOligosaccharidesCarbohydrate-binding ProteinCD207Crystal StructureGenetic PolymorphismGlycobiologyLectinSulfated Glycans

Identifiers

PMID24217250
PMCPMC3873535
OpenAlexW1995370380

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.