Evidence map›Paper›PMID 24216511›Full record

ArticleThe Journal of clinical investigation2013

Allogeneic T cell responses are regulated by a specific miRNA-mRNA network.

Yaping Sun, Isao Tawara, Meng Zhao, Zhaohui S Qin, Tomomi Toubai, Nathan Mathewson, Hiroya Tamaki, Evelyn Nieves, Arul M Chinnaiyan, Pavan Reddy

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 35 citations in OpenAlex.

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  18. Mature T cell responses are controlled by microRNA-142.The Journal of clinical investigation · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Yaping Sun
Isao Tawara
Meng Zhao
Zhaohui S Qin
Tomomi Toubai
Nathan Mathewson
Hiroya Tamaki
Evelyn Nieves
Arul M Chinnaiyan
Pavan Reddy
University of Michigan–Ann Arbor · USEmory University · USMie University Hospital · JP

Funding

Targeting antigen presentation to enhance GVL responses after Bone Marrow TransplR01HL090775 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI REDDY, PAVAN · 2008 to 2016
$3.4M
Role of APCs in Modulating Donor Natural Tregs Mediated Suppression of GVHDR01AI075284 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI REDDY, PAVAN · 2008 to 2012
$1.8M
Role of noncoding RNA in Regulating GVHDR01CA173878 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI REDDY, PAVAN · 2013 to 2017
$1.6M
Howard Hughes Medical InstituteNCI NIH HHS CA173878NCI NIH HHS R01 CA173878NHLBI NIH HHS HL-090775NHLBI NIH HHS R01 HL090775NIAID NIH HHS AI-075284NIAID NIH HHS R01 AI075284
6 · The paper itself

Abstract

Donor T cells that respond to host alloantigens following allogeneic bone marrow transplantation (BMT) induce graft-versus-host (GVH) responses, but their molecular landscape is not well understood. MicroRNAs (miRNAs) regulate gene (mRNA) expression and fine-tune the molecular responses of T cells. We stimulated naive T cells with either allogeneic or nonspecific stimuli and used argonaute cross-linked immunoprecipitation (CLIP) with subsequent ChIP microarray analyses to profile miR responses and their direct mRNA targets. We identified a unique expression pattern of miRs and mRNAs following the allostimulation of T cells and a high correlation between the expression of the identified miRs and a reduction of their mRNA targets. miRs and mRNAs that were predicted to be differentially regulated in allogeneic T cells compared with nonspecifically stimulated T cells were validated in vitro. These analyses identified wings apart-like homolog (Wapal) and synaptojanin 1 (Synj1) as potential regulators of allogeneic T cell responses. The expression of these molecular targets in vivo was confirmed in MHC-mismatched experimental BMT. Targeted silencing of either Wapal or Synj1 prevented the development of GVH response, confirming a role for these regulators in allogeneic T cell responses. Thus, this genome-wide analysis of miRNA-mRNA interactions identifies previously unrecognized molecular regulators of T cell responses.

Indexed as

AllograftsAnimalsArgonaute ProteinsBone Marrow TransplantationFemaleGene Expression ProfilingGene Expression RegulationGene Knockdown TechniquesGraft vs Host DiseaseImmunoprecipitationIsoantigensLymphocyte ActivationMiceMice, Inbred BALB CMice, Inbred C57BLMicroRNAsArgonaute ProteinsIsoantigensMicroRNAsNerve Tissue ProteinsPhosphoric Monoester HydrolasesProteinsRNA, MessengersynaptojaninWAPL protein, mouse

Identifiers

PMID24216511
PMCPMC3809794
OpenAlexW2162021128

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.