Evidence map›Paper›PMID 24215913›Full record

ArticleThe American journal of pathology2014

HCV infection selectively impairs type I but not type III IFN signaling.

Partha K Chandra, Lili Bao, Kyoungsub Song, Fatma M Aboulnasr, Darren P Baker, Nathan Shores, William C Wimley, Shuanghu Liu, Curt H Hagedorn, Serge Y Fuchs and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of pathology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 63 citations in OpenAlex.

  1. Review
  2. HCV-induced autophagy and innate immunity.Frontiers in immunology · 2024
    Review
  3. Article
  4. The role of autophagy in viral infections.Journal of biomedical science · 2023
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. Type I interferons and endoplasmic reticulum stress in health and disease.International review of cell and molecular biology · 2020
    Review
  15. Review
  16. Article
  17. The IFN-λ4 Conundrum: When a Good Interferon Goes Bad.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2019
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Partha K ChandraDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, Louisiana.
Lili BaoDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, Louisiana.
Kyoungsub SongDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, Louisiana.
Fatma M AboulnasrDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, Louisiana.
Darren P BakerBiogen Idec, Inc., Cambridge, Massachusetts.
Nathan ShoresDepartment of Gastroenterology and Hepatology, Tulane University School of Medicine, New Orleans, Louisiana.
William C WimleyDepartment of Biochemistry, Tulane University School of Medicine, New Orleans, Louisiana.
Shuanghu LiuDepartment of Medicine and Pathology, University of Utah School of Medicine, Salt Lake City, Utah.
Curt H HagedornDepartment of Medicine and Pathology, University of Utah School of Medicine, Salt Lake City, Utah.
Serge Y FuchsDepartment of Animal Biology, University of Pennsylvania, Philadelphia, Pennsylvania.
Tong WuDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, Louisiana.
Luis A BalartDepartment of Gastroenterology and Hepatology, Tulane University School of Medicine, New Orleans, Louisiana.
Srikanta DashDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, Louisiana. Electronic address: sdash@tulane.edu.
Tulane University · USUniversity of Utah · USBiogen (United States) · USUniversity of Pennsylvania · US

Funding

Role of HOS in Cell Transformation and ApoptosisR01CA092900 · NCI · UNIVERSITY OF PENNSYLVANIA · PI FUCHS, SERGE Y · 2001 to 2021
$5.3M
Hepatitis C Virus and Hepatocellular CarcinomaR01CA089121 · NCI · TULANE UNIVERSITY OF LOUISIANA · PI DASH, SRIKANTA · 2001 to 2016
$2.7M
IL-28B genotype and HCV treatment clearanceR01AI103106 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI DASH, SRIKANTA · 2013 to 2016
$1.5M
Hepatocarcinogenesis Secondary to Hepatitis CR01CA127481 · NCI · TULANE UNIVERSITY OF LOUISIANA · PI DASH, SRIKANTA · 2008 to 2012
$1.4M
NCI NIH HHS CA089121NCI NIH HHS CA127481NCI NIH HHS R01 CA089121NCI NIH HHS R01 CA092900NCI NIH HHS R01 CA127481NIAID NIH HHS AI103106NIAID NIH HHS R01 AI103106
6 · The paper itself

Abstract

A stable and persistent Hepatitis C virus (HCV) replication cell culture model was developed to examine clearance of viral replication during long-term treatment using interferon-α (IFN-α), IFN-λ, and ribavirin (RBV). Persistently HCV-infected cell culture exhibited an impaired antiviral response to IFN-α+RBV combination treatment, whereas IFN-λ treatment produced a strong and sustained antiviral response that cleared HCV replication. HCV replication in persistently infected cells induced chronic endoplasmic reticulum (ER) stress and an autophagy response that selectively down-regulated the functional IFN-α receptor-1 chain of type I, but not type II (IFN-γ) or type III (IFN-λ) IFN receptors. Down-regulation of IFN-α receptor-1 resulted in defective JAK-STAT signaling, impaired STAT phosphorylation, and impaired nuclear translocation of STAT. Furthermore, HCV replication impaired RBV uptake, because of reduced expression of the nucleoside transporters ENT1 and CNT1. Silencing ER stress and the autophagy response using chemical inhibitors or siRNA additively inhibited HCV replication and induced viral clearance by the IFN-α+RBV combination treatment. These results indicate that HCV induces ER stress and that the autophagy response selectively impairs type I (but not type III) IFN signaling, which explains why IFN-λ (but not IFN-α) produced a sustained antiviral response against HCV. The results also indicate that inhibition of ER stress and of the autophagy response overcomes IFN-α+RBV resistance mechanisms associated with HCV infection.

Indexed as

Antiviral AgentsAutophagyBlotting, WesternCell Line, TumorEndoplasmic Reticulum StressHepacivirusHepatitis CHepatocytesHumansInterferon-gammaInterferon Type IReverse Transcriptase Polymerase Chain ReactionSignal TransductionVirus ReplicationAntiviral AgentsInterferon-gammaInterferon Type I

Identifiers

PMID24215913
PMCPMC3873489
OpenAlexW2095298675

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.