Evidence map›Paper›PMID 24212574›Full record

ArticleApplied and environmental microbiology2014

Diversity in robustness of Lactococcus lactis strains during heat stress, oxidative stress, and spray drying stress.

Annereinou R Dijkstra, Meily C Setyawati, Jumamurat R Bayjanov, Wynand Alkema, Sacha A F T van Hijum, Peter A Bron, Jeroen Hugenholtz

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
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  7. Gene-Trait Matching and Prevalence of Nisin Tolerance Systems inFrontiers in bioengineering and biotechnology · 2021
    Article
  8. Frontiers in microbiology · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. PeerJ · 2017
    Article
  14. Stress Physiology of Lactic Acid Bacteria.Microbiology and molecular biology reviews : MMBR · 2016
    Review
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 1 country.

Annereinou R DijkstraKluyver Center for Genomics of Industrial Fermentation, Delft, The Netherlands.
Meily C Setyawati
Jumamurat R Bayjanov
Wynand Alkema
Sacha A F T van Hijum
Peter A Bron
Jeroen Hugenholtz
TiFN · NLCancer Genomics Centre · NLNederlands Instituut Voor Zuivel Oonderzoek · NLRadboud University Medical Center · NLRadboud University Nijmegen · NLUniversity of Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study we tested 39 Lactococcus lactis strains isolated from diverse habitats for their robustness under heat and oxidative stress, demonstrating high diversity in survival (up to 4 log units). Strains with an L. lactis subsp. lactis phenotype generally displayed more-robust phenotypes than strains with an L. lactis subsp. cremoris phenotype, whereas the habitat from which the strains had been isolated did not appear to influence stress survival. Comparison of the stress survival phenotypes with already available comparative genomic data sets revealed that the absence or presence of specific genes, including genes encoding a GntR family transcriptional regulator, a manganese ABC transporter permease, a cellobiose phosphotransferase system (PTS) component, the FtsY protein, and hypothetical proteins, was associated with heat or oxidative stress survival. Finally, 14 selected strains also displayed diversity in survival after spray drying, ranging from 20% survival for the most robust strains, which appears acceptable for industrial application, to 0.1% survival for the least-tolerant strains. The high and low levels of survival upon spray drying correlated clearly with the combined robustness under heat and oxidative stress. These results demonstrate the relevance of screening culture collections for robustness under heat and oxidative stress on top of the typical screening for acidifying and flavor-forming properties.

Indexed as

Genes, BacterialOxidative StressStress, PhysiologicalBacterial ProteinsDNA-Binding ProteinsGenetic Association StudiesGenetic VariationHeat-Shock ResponseLactococcus lactisPhenotypePhosphoenolpyruvate Sugar Phosphotransferase SystemBacterial ProteinsDNA-Binding ProteinsPhosphoenolpyruvate Sugar Phosphotransferase System

Identifiers

PMID24212574
PMCPMC3911111
OpenAlexW2091985233

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.