Evidence map›Paper›PMID 24211541›Full record

ArticleMatrix biology : journal of the International Society for Matrix Biology2014

Characterization of a murine type IIB procollagen-specific antibody.

Debabrata Patra, Elizabeth DeLassus, Audrey McAlinden, Linda J Sandell

Open access · greenAbstract read
In one paragraph

Article in Matrix biology : journal of the International Society for Matrix Biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Debabrata PatraDepartment of Orthopaedic Surgery, Washington University School of Medicine, BJCIH, St. Louis, MO 63110, USA. Electronic address: patrad@wudosis.wustl.edu.
Elizabeth DeLassusDepartment of Orthopaedic Surgery, Washington University School of Medicine, BJCIH, St. Louis, MO 63110, USA.
Audrey McAlindenDepartment of Orthopaedic Surgery, Washington University School of Medicine, BJCIH, St. Louis, MO 63110, USA; Department of Cell Biology and Physiology, Washington University School of Medicine, BJCIH, St. Louis, MO 63110, USA.
Linda J SandellDepartment of Orthopaedic Surgery, Washington University School of Medicine, BJCIH, St. Louis, MO 63110, USA; Department of Cell Biology and Physiology, Washington University School of Medicine, BJCIH, St. Louis, MO 63110, USA; Department of Biomedical Engineering, Washington University School of Medicine, BJCIH, St. Louis, MO 63110, USA.
Washington University in St. Louis · US

Funding

The Role of the Osteoblast Secretome in Bone FormationP30AR057235 · NIAMS · WASHINGTON UNIVERSITY · PI SILVA, MATTHEW J · 2009 to 2018
$5.7M
FUNCTION AND REGULATION OF CD/RAPR01AR045550 · NIAMS · WASHINGTON UNIVERSITY · PI SANDELL, LINDA J · 1998 to 2013
$4.1M
CIS REGULATORY MOTIFS IN ADULT ARTICULAR CHONDROYTESR01AR050847 · NIAMS · WASHINGTON UNIVERSITY · PI SANDELL, LINDA J · 2003 to 2011
$2.0M
Genetics of Cartilage Regeneration and OsteoarthritisR01AR063757 · NIAMS · WASHINGTON UNIVERSITY · PI CHEVERUD, JAMES M, SANDELL, LINDA J · 2013 to 2014
$708k
GENERATION OF A NOVEL RECOMBINANT MOUSE MODEL EXPRESSING ONLY ONE COL2A1 ISOFORMR21AR053513 · NIAMS · WASHINGTON UNIVERSITY · PI MCALINDEN, AUDREY · 2007 to 2008
$356k
NIAMS NIH HHS P30 AR057235NIAMS NIH HHS P30AR057235NIAMS NIH HHS R01 AR045550NIAMS NIH HHS R01 AR050847NIAMS NIH HHS R01 AR063757NIAMS NIH HHS R21 AR053513
6 · The paper itself

Abstract

Type II collagen is the major collagenous component of the cartilage extracellular matrix; formation of a covalently cross-linked type II collagen network provides cartilage with important tensile properties. The Col2a1 gene is encoded by 54 exons, of which exon 2 is subject to alternative splicing, resulting in different isoforms named IIA, IIB, IIC and IID. The two major procollagen protein isoforms are type IIA and type IIB procollagen. Type IIA procollagen mRNA contains exon 2 and is generated predominantly by chondroprogenitor cells and other non-cartilaginous tissues. Differentiated chondrocytes generate type IIB procollagen, devoid of exon 2. Although type IIA procollagen is produced in certain non-collagenous tissues during development, this developmentally-regulated alternative splicing switch to type IIB procollagen is restricted to cartilage cells. Though a much studied and characterized molecule, the importance of the various type II collagen protein isoforms in cartilage development and homeostasis is still not completely understood. Effective antibodies against specific epitopes of these isoforms can be useful tools to decipher function. However, most type II collagen antibodies to date recognize either all isoforms or the IIA procollagen isoform. To specifically identify the murine type IIB procollagen, we have generated a rabbit antibody (termed IIBN) directed to a peptide sequence that spans the murine exon 1-3 peptide junction. Characterization of the affinity-purified antibody by western blotting of collagens extracted from wild type murine cartilage or cartilage from Col2a1(+ex2) knock-in mice (which generates predominantly the type IIA procollagen isoform) demonstrated that the IIBN antibody is specific to the type IIB procollagen isoform. IIBN antibody was also able to detect the native type IIB procollagen in the hypertrophic chondrocytes of the wild type growth plate, but not in those of the Col2a1(+ex2) homozygous knock-in mice, by both immunofluorescence and immunohistochemical studies. Thus the IIBN antibody will permit an in-depth characterization of the distribution of IIB procollagen isoform in mouse skeletal tissues. In addition, this antibody will be an important reagent for characterizing mutant type II collagen phenotypes and for monitoring type II procollagen processing and trafficking.

Indexed as

Alternative SplicingAnimalsAntibody SpecificityCartilageCell DifferentiationChondrogenesisCollagen Type IIExtracellular MatrixGene Knock-In TechniquesMiceProcollagenProtein IsoformsRabbitsRNA, MessengerCol2a1 protein, mouseCollagen Type IIProcollagenProtein IsoformsRNA, MessengerAntibodyCartilageChondrocyteType IIA procollagenType IIB procollagenType II collagen

Identifiers

PMID24211541
PMCPMC4013248
OpenAlexW2045444831

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.