Evidence map›Paper›PMID 24210113›Full record

ArticleVirology2013

Characterizing monkeypox virus specific CD8+ T cell epitopes in rhesus macaques.

Haifeng Song, John Sidney, Roger W Wiseman, Nicole Josleyn, Melanie Cohen, Joseph E Blaney, Peter B Jahrling, Alessandro Sette

Open access · greenAbstract read
In one paragraph

Article in Virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact, top 93% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Monkeypox Virus Infections in Humans.Clinical microbiology reviews · 2022
    Review
  9. Article
  10. Article
  11. Comprehensive literature review of monkeypox.Emerging microbes & infections · 2022
    Review
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Haifeng SongIntegrated Research Facility, NIAID/NIH, Frederick, MD 21702, USA. Electronic address: songhai@mail.nih.gov.
John Sidney
Roger W Wiseman
Nicole Josleyn
Melanie Cohen
Joseph E Blaney
Peter B Jahrling
Alessandro Sette
National Institutes of Health · USLa Jolla Institute for Immunology · USUniversity of Wisconsin–Madison · US

Funding

Intramural NIH HHS Z99 AI999999NIAID NIH HHS HHSN272200700016I
6 · The paper itself

Abstract

To characterize T cell epitopes in monkeypox virus (MPXV) infected rhesus macaques, we utilized IFNγ Elispot assay to screen 400 predicted peptides from 20MPXV proteins. Two peptides from the F8L protein, an analog of E9L protein in vaccinia, were found to elicit CD8+ T cell responses. Prediction and in vitro MHC binding analyses suggest that one is restricted by Mamu-A1(⁎)001 and another by Mamu-A1(⁎)002. The Mamu-A1(⁎)002 epitope is completely identical in all reported sequences for variola, vaccinia, cowpox and MPXV. The Mamu-A1(⁎)001 epitope is conserved in MPXV and vaccinia, and has one residue substitution (V6>I) in some cowpox sequences and all variola sequences. Given CD8+ T-cell epitopes from E9L were also identified in humans and mice, our data suggested that F8L/E9L may be a dominant pox viral protein for CD8+ T cell responses, and may be considered as a target when designing vaccines that target pox-specific T cell responses.

Indexed as

CD8-Positive T-LymphocytesEpitopes, T-LymphocyteMonkeypox virusAnimalsEnzyme-Linked Immunospot AssayHistocompatibility Antigens Class IInterferon-gammaMacaca mulattaMpox, MonkeypoxProtein BindingEpitopes, T-LymphocyteHistocompatibility Antigens Class IInterferon-gammaMamu-A 01 antigenMamu-A 02 antigenBioinformatics analysisCD8+ T cellsElispotMonkeypox virusPeptidesRhesusT cell epitopes

Identifiers

PMID24210113
PMCPMC4771384
OpenAlexW2029040835

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.