Evidence map›Paper›PMID 24209717›Full record

ArticleThe Journal of pediatrics2014

Comparison of frozen and unfrozen blood spots for gene expression studies.

Changshuai Wei, Qing Lu, Sok Kean Khoo, Madeleine Lenski, Raina N Fichorova, Alan Leviton, Nigel Paneth

Abstract readComparative Study
In one paragraph

Article in The Journal of pediatrics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. RNA sequencing of archived neonatal dried blood spots.Molecular genetics and metabolism reports · 2017
    Article
  6. Article
  7. Psychological resilience and the gene regulatory impact of posttraumatic stress in Nepali child soldiers.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  8. Article
  9. Emerging issues in public health genomics.Annual review of genomics and human genetics · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Changshuai WeiDepartment of Epidemiology and Biostatistics, College of Human Medicine, Michigan State University, East Lansing, MI.
Qing LuDepartment of Epidemiology and Biostatistics, College of Human Medicine, Michigan State University, East Lansing, MI.
Sok Kean KhooLaboratory of Microarray Technology, Van Andel Research Institute, Grand Rapids, MI.
Madeleine LenskiDepartment of Epidemiology and Biostatistics, College of Human Medicine, Michigan State University, East Lansing, MI.
Raina N FichorovaLaboratory of Genital Tract Biology, Department of Obstetrics, Gynecology, and Reproductive Biology, Harvard Medical School and Brigham and Women's Hospital, Boston, MA.
Alan LevitonNeuroepidemiology Unit, Department of Neurology, Boston Children's Hospital, Harvard University, Boston, MA.
Nigel PanethDepartment of Epidemiology and Biostatistics, College of Human Medicine, Michigan State University, East Lansing, MI; Department of Pediatrics and Human Development, College of Human Medicine, Michigan State University, East Lansing, MI. Electronic address: paneth@msu.edu.

Funding

Neonatal Biomarkers in Extremely Preterm Babies Predict Childhood Brain DisordersU01NS040069 · NINDS · CHILDREN'S HOSPITAL BOSTON · PI KUBAN, KARL · 2001 to 2014
$34.0M
New Paradigms of Cerebral Palsy Etiology: A Comprehensive Case Control StudyR01NS055101 · NINDS · MICHIGAN STATE UNIVERSITY · PI PANETH, NIGEL SEFTON · 2009 to 2010
$1.9M
NINDS NIH HHS R01 NS055101NINDS NIH HHS U01 NS040069NINDS NIH HHS U01NS040069
6 · The paper itself

Abstract

We studied gene expression in 9 sets of paired newborn blood spots stored for 8-10 years in either the frozen state or the unfrozen state. Fewer genes were expressed in unfrozen spots, but the average correlation coefficient for overall gene expression comparing the frozen and unfrozen state was 0.771 (95% CI, 0.700-0.828).

Indexed as

CryopreservationFreezingNeonatal ScreeningBlood Specimen CollectionGene Expression ProfilingHumansInfant, NewbornOligonucleotide Array Sequence AnalysisRNA, MessengerTime FactorsRNA, MessengerELGANExtremely Low Gestational Age Newborns

Identifiers

PMID24209717
PMCPMC4326080

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.