Evidence map›Paper›PMID 24209611›Full record

ArticleBMC evolutionary biology2013

Genetic susceptibility to infectious disease in East African Shorthorn Zebu: a genome-wide analysis of the effect of heterozygosity and exotic introgression.

Gemma G R Murray, Mark E J Woolhouse, Miika Tapio, Mary N Mbole-Kariuki, Tad S Sonstegard, Samuel M Thumbi, Amy E Jennings, Ilana Conradie van Wyk, Margo Chase-Topping, Henry Kiara and 4 more

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Serological profile of respiratory viruses in unvaccinated steers upon their arrival at Brazilian feedlot facilities.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 9 institutions in 5 countries.

Gemma G R MurrayInstitute of Evolutionary Biology, and Centre for Immunity, Infection and Evolution, University of Edinburgh, Edinburgh EH9 3JT, UK. ggrm2@cam.ac.uk.
Mark E J Woolhouse
Miika Tapio
Mary N Mbole-Kariuki
Tad S Sonstegard
Samuel M Thumbi
Amy E Jennings
Ilana Conradie van Wyk
Margo Chase-Topping
Henry Kiara
Phil Toye
Koos Coetzer
Barend M deC Bronsvoort
Olivier Hanotte
Centre for Immunity, Infection and Evolution · GBInternational Livestock Research Institute · KERoslin Institute · GBUniversity of Nottingham · GBAgricultural Research Service · USAgrifood Research Finland · FIOnderstepoort Veterinary Academic Hospital · ZAUniversity of Edinburgh · GBUniversity of Pretoria · ZA

Funding

Biotechnology and Biological Sciences Research Council BBS/E/D/20211553Biotechnology and Biological Sciences Research Council BBS/E/D/20211554Wellcome Trust WT079445MF
6 · The paper itself

Abstract

backgroundPositive multi-locus heterozygosity-fitness correlations have been observed in a number of natural populations. They have been explained by the correlation between heterozygosity and inbreeding, and the negative effect of inbreeding on fitness (inbreeding depression). Exotic introgression in a locally adapted population has also been found to reduce fitness (outbreeding depression) through the breaking-up of co-adapted genes, or the introduction of non-locally adapted gene variants. In this study we examined the inter-relationships between genome-wide heterozygosity, introgression, and death or illness as a result of infectious disease in a sample of calves from an indigenous population of East African Shorthorn Zebu (crossbred Bos taurus x Bos indicus) in western Kenya. These calves were observed from birth to one year of age as part of the Infectious Disease in East African Livestock (IDEAL) project. Some of the calves were found to be genetic hybrids, resulting from the recent introgression of European cattle breed(s) into the indigenous population. European cattle are known to be less well adapted to the infectious diseases present in East Africa. If death and illness as a result of infectious disease have a genetic basis within the population, we would expect both a negative association of these outcomes with introgression and a positive association with heterozygosity.

resultsIn this indigenous livestock population we observed negative associations between heterozygosity and both death and illness as a result of infectious disease and a positive association between European taurine introgression and episodes of clinical illness.

conclusionWe observe the effects of both inbreeding and outbreeding depression in the East African Shorthorn Zebu, and therefore find evidence of a genetic component to vulnerability to infectious disease. These results indicate that the significant burden of infectious disease in this population could, in principle, be reduced by altered breeding practices.

Indexed as

Genetic Predisposition to DiseaseAnimalsCattleCattle DiseasesCommunicable DiseasesGenome-Wide Association StudyHeterozygoteInbreedingKenyaPolymorphism, Single Nucleotide

Identifiers

PMID24209611
PMCPMC3828575
OpenAlexW2108914589

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.