Evidence map›Paper›PMID 24207025›Full record

ArticleMolecular cell2013

Acetylation of RNA polymerase II regulates growth-factor-induced gene transcription in mammalian cells.

Sebastian Schröder, Eva Herker, Friederike Itzen, Daniel He, Sean Thomas, Daniel A Gilchrist, Katrin Kaehlcke, Sungyoo Cho, Katherine S Pollard, John A Capra and 6 more

Abstract read
In one paragraph

Article in Molecular cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 115 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Targeting lysine acetylation readers and writers.Nature reviews. Drug discovery · 2025
    Review
  5. Cis-Regulatory Elements in Mammals.International journal of molecular sciences · 2023
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
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  14. Review
  15. Review
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  17. Article
  18. Mechanisms of Enhancer-Promoter Interactions in Higher Eukaryotes.International journal of molecular sciences · 2021
    Review
  19. Review
  20. Review

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 2 countries.

Sebastian SchröderGladstone Institutes, San Francisco, CA 94158, USA; University of California, San Francisco, San Francisco, CA 94143, USA.
Eva Herker
Friederike Itzen
Daniel He
Sean Thomas
Daniel A Gilchrist
Katrin Kaehlcke
Sungyoo Cho
Katherine S Pollard
John A Capra
Martina Schnölzer
Philip A Cole
Matthias Geyer
Benoit G Bruneau
Karen Adelman
Melanie Ott
Gladstone Institutes · USUniversity of California, San Francisco · USMax Planck Institute of Molecular Physiology · DENational Institute of Environmental Health Sciences · USHeidelberg University · DEJohns Hopkins University · USLeibniz Institute of Virology (LIV) · DE

Funding

Investigating Transcriptional Responses to the EnvironmentZIAES101987 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI ADELMAN, KAREN L · 2009 to 2016
$15.9M
The Epigenetic Landscape of Heart DevelopmentU01HL098179 · NHLBI · J. DAVID GLADSTONE INSTITUTES · PI BOYER, LAURIE A, BRUNEAU, BENOIT GAETAN · 2009 to 2014
$10.0M
Role of Factor Acetylation in the Regulation of HIV TranscriptionR37AI083139 · NIAID · J. DAVID GLADSTONE INSTITUTES · PI Melanie Maria Ott · 2019 to 2026
$5.5M
Protein Acylation and Methylation Mechanisms_Administrative SupplementR37GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2013 to 2022
$4.1M
Role of Factor Acetylation in the Regulation of HIV TranscriptionR01AI083139 · NIAID · J. DAVID GLADSTONE INSTITUTES · PI OTT, MELANIE MARIA · 2009 to 2017
$3.9M
Mechanisms &Inhibition of Histone AcetyltransferasesR01GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2001 to 2012
$3.8M
Investigating Transcriptional Responses to the EnvironmentZ01ES101987 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI ADELMAN, KAREN L · 2006 to 2008
$2.8M
What Made Us Human?R01GM082901 · NIGMS · J. DAVID GLADSTONE INSTITUTES · PI POLLARD, KATHERINE S. · 2008 to 2011
$1.4M
Intramural NIH HHS Z01 ES101987NHLBI NIH HHS U01 HL098179NHLBI NIH HHS U01HL098179NIAID NIH HHS AI083139-02NIAID NIH HHS R01 AI083139NIAID NIH HHS R37 AI083139NIGMS NIH HHS GM62437NIGMS NIH HHS GM82901NIGMS NIH HHS R01 GM062437NIGMS NIH HHS R01 GM082901NIGMS NIH HHS R37 GM062437
6 · The paper itself

Abstract

Lysine acetylation regulates transcription by targeting histones and nonhistone proteins. Here we report that the central regulator of transcription, RNA polymerase II, is subject to acetylation in mammalian cells. Acetylation occurs at eight lysines within the C-terminal domain (CTD) of the largest polymerase subunit and is mediated by p300/KAT3B. CTD acetylation is specifically enriched downstream of the transcription start sites of polymerase-occupied genes genome-wide, indicating a role in early stages of transcription initiation or elongation. Mutation of lysines or p300 inhibitor treatment causes the loss of epidermal growth-factor-induced expression of c-Fos and Egr2, immediate-early genes with promoter-proximally paused polymerases, but does not affect expression or polymerase occupancy at housekeeping genes. Our studies identify acetylation as a new modification of the mammalian RNA polymerase II required for the induction of growth factor response genes.

Indexed as

Transcription, GeneticAcetylationAnimalsEarly Growth Response Protein 2Embryonic Stem CellsGene Expression RegulationGenes, fosHistonesHumansLysinep300-CBP Transcription FactorsPromoter Regions, GeneticRNA Polymerase IIEarly Growth Response Protein 2Egr2 protein, mouseHistonesLysinep300-CBP Transcription FactorsRNA Polymerase II

Identifiers

PMID24207025
PMCPMC3936344
OpenAlexW2013298988

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.