Evidence map›Paper›PMID 24205378›Full record

ArticlePloS one2013

A quantitative assessment of costimulation and phosphatase activity on microclusters in early T cell signaling.

J Joris Witsenburg, Heike Glauner, Jörg P Müller, Johannes M M Groenewoud, Günter Roth, Frank-Dietmar Böhmer, Merel J W Adjobo-Hermans, Roland Brock

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

J Joris WitsenburgDepartment of Biochemistry, Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Centre, Nijmegen, The Netherlands.
Heike Glauner
Jörg P Müller
Johannes M M Groenewoud
Günter Roth
Frank-Dietmar Böhmer
Merel J W Adjobo-Hermans
Roland Brock
Radboud University Nijmegen · NLJena University Hospital · DERadboud University Medical Center · NLUniversity of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

T cell signaling is triggered through stimulation of the T cell receptor and costimulatory receptors. Receptor activation leads to the formation of membrane-proximal protein microclusters. These clusters undergo tyrosine phosphorylation and organize multiprotein complexes thereby acting as molecular signaling platforms. Little is known about how the quantity and phosphorylation levels of microclusters are affected by costimulatory signals and the activity of specific signaling proteins. We combined micrometer-sized, microcontact printed, striped patterns of different stimuli and simultaneous analysis of different cell strains with image processing protocols to address this problem. First, we validated the stimulation protocol by showing that high expression levels CD28 result in increased cell spreading. Subsequently, we addressed the role of costimulation and a specific phosphotyrosine phosphatase in cluster formation by including a SHP2 knock-down strain in our system. Distinguishing cell strains using carboxyfluorescein succinimidyl ester enabled a comparison within single samples. SHP2 exerted its effect by lowering phosphorylation levels of individual clusters while CD28 costimulation mainly increased the number of signaling clusters and cell spreading. These effects were observed for general tyrosine phosphorylation of clusters and for phosphorylated PLCγ1. Our analysis enables a clear distinction between factors determining the number of microclusters and those that act on these signaling platforms.

Indexed as

Signal TransductionCD28 AntigensCostimulatory and Inhibitory T-Cell ReceptorsGene Knockdown TechniquesHumansJurkat CellsPhospholipase C gammaPhosphoric Monoester HydrolasesPhosphorylationProtein Tyrosine Phosphatase, Non-Receptor Type 11Receptors, Antigen, T-CellT-LymphocytesTyrosineCD28 AntigensCostimulatory and Inhibitory T-Cell ReceptorsPhospholipase C gammaPhosphoric Monoester HydrolasesProtein Tyrosine Phosphatase, Non-Receptor Type 11Receptors, Antigen, T-CellTyrosine

Identifiers

PMID24205378
PMCPMC3813591
OpenAlexW2134173075

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.