Evidence map›Paper›PMID 24205214›Full record

ArticlePloS one2013

Complex relationship between mismatch repair proteins and MBD4 during immunoglobulin class switch recombination.

Fernando Grigera, Alfonso Bellacosa, Amy L Kenter

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Fernando GrigeraDepartment of Microbiology and Immunology, University of Illinois College of Medicine, Chicago, Illinois, United States of America.
Alfonso Bellacosa
Amy L Kenter
Fox Chase Cancer Center · USIllinois College · USUniversity of Illinois Urbana-Champaign · US

Funding

Factors and DNA Motifs Involved in Ig Class SwitchR01AI052400 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KENTER, AMY L · 2003 to 2012
$3.7M
The MED1 Protein in DNA Damage Response and RepairR01CA078412 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI BELLACOSA, ALFONSO · 2004 to 2014
$3.7M
Class switch recombination during early B cell developmentR21AI106328 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KENTER, AMY L · 2013 to 2014
$424k
NCI NIH HHS R01 CA078412NIAID NIH HHS AI052400NIAID NIH HHS R01 AI052400NIAID NIH HHS R21 AI106328
6 · The paper itself

Abstract

Mismatch repair (MMR) safeguards against genomic instability and is required for efficient Ig class switch recombination (CSR). Methyl CpG binding domain protein 4 (MBD4) binds to MutL homologue 1 (MLH1) and controls the post-transcriptional level of several MMR proteins, including MutS homologue 2 (MSH2). We show that in WT B cells activated for CSR, MBD4 is induced and interacts with MMR proteins, thereby implying a role for MBD4 in CSR. However, CSR is in the normal range in Mbd4 deficient mice deleted for exons 2-5 despite concomitant reduction of MSH2. We show by comparison in Msh2(+/-) B cells that a two-fold reduction of MSH2 and MBD4 proteins is correlated with impaired CSR. It is therefore surprising that CSR occurs at normal frequencies in the Mbd4 deficient B cells where MSH2 is reduced. We find that a variant Mbd4 transcript spanning exons 1,6-8 is expressed in Mbd4 deficient B cells. This transcript can be ectopically expressed and produces a truncated MBD4 peptide. Thus, the 3' end of the Mbd4 locus is not silent in Mbd4 deficient B cells and may contribute to CSR. Our findings highlight a complex relationship between MBD4 and MMR proteins in B cells and a potential reconsideration of their role in CSR.

Indexed as

AnimalsB-LymphocytesCells, CulturedDNA-Binding ProteinsDNA Mismatch RepairDNA RepairEndodeoxyribonucleasesExonsGene RearrangementImmunoglobulin Class SwitchingImmunoglobulinsMiceMice, Inbred C57BLMutS Homolog 2 ProteinNuclear ProteinsRecombination, GeneticDNA-Binding ProteinsEndodeoxyribonucleasesImmunoglobulinsMbd4 protein, mouseMsh2 protein, mouseMutS Homolog 2 ProteinNuclear Proteins

Identifiers

PMID24205214
PMCPMC3812156
OpenAlexW2040286932

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.