Evidence map›Paper›PMID 24205042›Full record

ArticlePloS one2013

Identification of differentially expressed transcripts and pathways in blood one week and six months following implant of left ventricular assist devices.

Adam Mitchell, Weihua Guan, Rodney Staggs, Aimee Hamel, Sameh Hozayen, Neeta Adhikari, Suzanne Grindle, Snider Desir, Ranjit John, Jennifer L Hall and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Circulating microbial RNA and health.Scientific reports · 2015
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Adam MitchellLillehei Heart Institute, Department of Medicine, University of Minnesota, Minneapolis, Minnesota, United States of America ; Division of Cardiology, Department of Medicine, University of Minnesota, Minneapolis, Minnesota, United States of America.
Weihua Guan
Rodney Staggs
Aimee Hamel
Sameh Hozayen
Neeta Adhikari
Suzanne Grindle
Snider Desir
Ranjit John
Jennifer L Hall
Peter Eckman
University of Minnesota · USMinneapolis Heart Institute Foundation · US

Funding

Genetic Risk Factors of Myocyte Contractility in Human Heart FailureR21HL104596 · NHLBI · UNIVERSITY OF MINNESOTA · PI HALL, JENNIFER L · 2011 to 2012
$421k
NHLBI NIH HHS 1R21HL104596-01NHLBI NIH HHS R21 HL104596
6 · The paper itself

Abstract

introductionContinuous-flow left ventricular assist devices (LVADs) are an established therapy for patients with end-stage heart failure. The short- and long-term impact of these devices on peripheral blood gene expression has not been characterized, and may provide insight into the molecular pathways mediated in response to left ventricular remodeling and an improvement in overall systemic circulation. We performed RNA sequencing to identify genes and pathways influenced by these devices.

methodsRNA was extracted from blood of 9 heart failure patients (8 male) prior to LVAD implantation, and at 7 and 180 days postoperatively. Libraries were sequenced on an Illumina HiSeq2000 and sequences mapped to the human Ensembl GRCh37.67 genome assembly.

resultsA specific set of genes involved in regulating cellular immune response, antigen presentation, and T cell activation and survival were down-regulated 7 days after LVAD placement. 6 months following LVAD placement, the expression levels of these genes were significantly increased; yet importantly, remained significantly lower than age and sex-matched samples from healthy controls.

conclusionsIn summary, this genomic analysis identified a significant decrease in the expression of genes that promote a healthy immune response in patients with heart failure that was partially restored 6 months following LVAD implant.

Indexed as

Gene Expression ProfilingAgedBiomarkersBlotting, WesternFemaleHeart-Assist DevicesHeart FailureHeart TransplantationHumansMaleMiddle AgedOligonucleotide Array Sequence AnalysisReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, MessengerTime FactorsBiomarkersRNA, Messenger

Identifiers

PMID24205042
PMCPMC3804545
OpenAlexW2004596551

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.