Evidence map›Paper›PMID 24204730›Full record

ArticlePloS one2013

Genetic differentiation of the mitochondrial cytochrome oxidase C subunit I gene in genus Paramecium (Protista, Ciliophora).

Yan Zhao, Eleni Gentekaki, Zhenzhen Yi, Xiaofeng Lin

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 51 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Yan ZhaoLaboratory of Protozoology, Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, China ; Laboratory of Protozoology, College of Life Science, South China Normal University, Guangzhou, China.
Eleni Gentekaki
Zhenzhen Yi
Xiaofeng Lin
South China Normal University · CNDalhousie University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe mitochondrial cytochrome c oxidase subunit I (COI) gene is being used increasingly for evaluating inter- and intra-specific genetic diversity of ciliated protists. However, very few studies focus on assessing genetic divergence of the COI gene within individuals and how its presence might affect species identification and population structure analyses. METHODOLOGY/PRINCIPAL

findingsWe evaluated the genetic variation of the COI gene in five Paramecium species for a total of 147 clones derived from 21 individuals and 7 populations. We identified a total of 90 haplotypes with several individuals carrying more than one haplotype. Parsimony network and phylogenetic tree analyses revealed that intra-individual diversity had no effect in species identification and only a minor effect on population structure.

conclusionsOur results suggest that the COI gene is a suitable marker for resolving inter- and intra-specific relationships of Paramecium spp.

Indexed as

Base SequenceChinaDNA, MitochondrialDNA, ProtozoanElectron Transport Complex IVGenes, MitochondrialGenetic VariationGeographyHaplotypesMolecular Sequence DataParameciumPhylogenyProtozoan ProteinsSequence Analysis, DNASequence Homology, Nucleic AcidSpecies SpecificityDNA, MitochondrialDNA, ProtozoanElectron Transport Complex IVProtozoan Proteins

Identifiers

PMID24204730
PMCPMC3812207
OpenAlexW2163715873

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.