Evidence map›Paper›PMID 24204716›Full record

ArticlePloS one2013

A genome-wide survey of transgenerational genetic effects in autism.

Kathryn M Tsang, Lisa A Croen, Anthony R Torres, Martin Kharrazi, Gerald N Delorenze, Gayle C Windham, Cathleen K Yoshida, Ousseny Zerbo, Lauren A Weiss

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
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  7. Article
  8. Article
  9. Peripheral Expression ofPsychiatry and clinical psychopharmacology · 2021
    Article
  10. Article
  11. Review
  12. The Role of Copy Number Variations andMolecular syndromology · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Structure and Functions of Sidekicks.Frontiers in molecular neuroscience · 2020
    Review
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kathryn M TsangDepartment of Psychiatry and Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America.
Lisa A Croen
Anthony R Torres
Martin Kharrazi
Gerald N Delorenze
Gayle C Windham
Cathleen K Yoshida
Ousseny Zerbo
Lauren A Weiss

Funding

Genomewide Search--Autism Susceptibility Loci-supplementR01MH064547 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GESCHWIND, DANIEL H · 2002 to 2006
$9.6M
Center for Genomic and Phenomic Studies in AutismU24MH081810 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LAJONCHERE, CLARA M · 2007 to 2011
$8.3M
Prenatal and Neonatal Biologic Markers for AutismR01ES016669 · NIEHS · KAISER FOUNDATION RESEARCH INSTITUTE · PI CROEN, LISA A · 2010 to 2014
$3.5M
MOLECULAR GENETICS OF INFANTILE AUTISMR01MH052708 · NIMH · STANFORD UNIVERSITY · PI RISCH, NEIL J · 1995 to 2000
$283k
NEUROTRANSMITTER RECEPTORSP01MH039437 · NIMH · STANFORD UNIVERSITY · PI CIARANELLO, ROLAND D · 1985 to 1993
–
Medical Research Council G0601030NIEHS NIH HHS R01 ES016669NIEHS NIH HHS R01-ES016669NIMH NIH HHS 1U24MH081810NIMH NIH HHS MH00219NIMH NIH HHS MH00980NIMH NIH HHS MH39437NIMH NIH HHS MH52708NIMH NIH HHS MH64547NIMH NIH HHS R01 MH064547NIMH NIH HHS U24 MH081810PHS HHS 0034328PHS HHS G0601030Wellcome TrustWellcome Trust 075491/Z/04
6 · The paper itself

Abstract

Effects of parental genotype or parent-offspring genetic interaction are well established in model organisms for a variety of traits. However, these transgenerational genetic models are rarely studied in humans. We have utilized an autism case-control study with 735 mother-child pairs to perform genome-wide screening for maternal genetic effects and maternal-offspring genetic interaction. We used simple models of single locus parent-child interaction and identified suggestive results (P<10(-4)) that cannot be explained by main effects, but no genome-wide significant signals. Some of these maternal and maternal-child associations were in or adjacent to autism candidate genes including: PCDH9, FOXP1, GABRB3, NRXN1, RELN, MACROD2, FHIT, RORA, CNTN4, CNTNAP2, FAM135B, LAMA1, NFIA, NLGN4X, RAPGEF4, and SDK1. We attempted validation of potential autism association under maternal-specific models using maternal-paternal comparison in family-based GWAS datasets. Our results suggest that further study of parental genetic effects and parent-child interaction in autism is warranted.

Indexed as

Polymorphism, Single NucleotideAdultAutistic DisorderCase-Control StudiesChildDatabases, GeneticFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansModels, GeneticMother-Child RelationsPhenotypeReelin ProteinReelin Protein

Identifiers

PMID24204716
PMCPMC3811986

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.