Evidence map›Paper›PMID 24204690›Full record

ArticlePloS one2013

Cancer-predicting gene expression changes in colonic mucosa of Western diet fed Mlh1+/- mice.

Marjaana Pussila, Laura Sarantaus, Denis Dermadi Bebek, Satu Valo, Nima Reyhani, Saara Ollila, Essi Päivärinta, Päivi Peltomäki, Marja Mutanen, Minna Nyström

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Marjaana PussilaDepartment of Biosciences, University of Helsinki, Helsinki, Finland.
Laura Sarantaus
Denis Dermadi Bebek
Satu Valo
Nima Reyhani
Saara Ollila
Essi Päivärinta
Päivi Peltomäki
Marja Mutanen
Minna Nyström
University of Helsinki · FIAalto University · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal cancer (CRC) is the second most common cause of cancer-related deaths in the Western world and interactions between genetic and environmental factors, including diet, are suggested to play a critical role in its etiology. We conducted a long-term feeding experiment in the mouse to address gene expression and methylation changes arising in histologically normal colonic mucosa as putative cancer-predisposing events available for early detection. The expression of 94 growth-regulatory genes previously linked to human CRC was studied at two time points (5 weeks and 12 months of age) in the heterozygote Mlh1(+/-) mice, an animal model for human Lynch syndrome (LS), and wild type Mlh1(+/+) littermates, fed by either Western-style (WD) or AIN-93G control diet. In mice fed with WD, proximal colon mucosa, the predominant site of cancer formation in LS, exhibited a significant expression decrease in tumor suppressor genes, Dkk1, Hoxd1, Slc5a8, and Socs1, the latter two only in the Mlh1(+/-) mice. Reduced mRNA expression was accompanied by increased promoter methylation of the respective genes. The strongest expression decrease (7.3 fold) together with a significant increase in its promoter methylation was seen in Dkk1, an antagonist of the canonical Wnt signaling pathway. Furthermore, the inactivation of Dkk1 seems to predispose to neoplasias in the proximal colon. This and the fact that Mlh1 which showed only modest methylation was still expressed in both Mlh1(+/-) and Mlh1(+/+) mice indicate that the expression decreases and the inactivation of Dkk1 in particular is a prominent early marker for colon oncogenesis.

Indexed as

Diet, High-FatGene Expression Regulation, NeoplasticAdaptor Proteins, Signal TransducingAnimalsCation Transport ProteinsColonColonic NeoplasmsColorectal Neoplasms, Hereditary NonpolyposisDisease Models, AnimalDNA MethylationHomeodomain ProteinsHumansIntercellular Signaling Peptides and ProteinsMiceMice, 129 StrainMice, KnockoutAdaptor Proteins, Signal TransducingCation Transport ProteinsDkk1 protein, mouseHomeodomain ProteinsHoxd1 protein, mouseIntercellular Signaling Peptides and ProteinsMlh1 protein, mouseMonocarboxylic Acid TransportersMutL Protein Homolog 1Nuclear ProteinsSlc5a8 protein, mouseSocs1 protein, mouseSuppressor of Cytokine Signaling 1 ProteinSuppressor of Cytokine Signaling Proteins

Identifiers

PMID24204690
PMCPMC3815089
OpenAlexW1980779035

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.