ArticlePloS one2013
QTL mapping of leafy heads by genome resequencing in the RIL population of Brassica rapa.
Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.
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Who cites it
37 citing papers in PubMed, 72 citations in OpenAlex.
- ExploitingPlants (Basel, Switzerland) · 2024Review
- Integratedly analyzed quantitative proteomics with transcriptomics to discover key genes viaFrontiers in plant science · 2024Article
- Physiological Control and Genetic Basis of Leaf Curvature and Heading in Brassica rapa L.Journal of advanced research · 2023Review
- Role of Brassica orphan gene BrLFM on leafy head formation in Chinese cabbage (Brassica rapa).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- The Roles of Gibberellins in Regulating Leaf Development.Plants (Basel, Switzerland) · 2023Review
- Loss-of-function of SAWTOOTH 1 affects leaf dorsiventrality genes to promote leafy heads in lettuce.The Plant cell · 2022Article
- Genetic and Transcriptome Analysis of Leaf Trichome Development in Chinese Cabbage (International journal of molecular sciences · 2022Article
- OCTOPUS regulates BIN2 to control leaf curvature in Chinese cabbage.Proceedings of the National Academy of Sciences of the United States of America · 2022Article
- BrKAO2 mutations disrupt leafy head formation in Chinese cabbage (Brassica rapa L. ssp. pekinensis).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Understanding the molecular mechanism of leaf morphogenesis in vegetable crops conduces to breeding process.Frontiers in plant science · 2022Review
- Identification of QTL related to anther color and hull color by RAD sequencing in a RIL population of Setaria italica.BMC genomics · 2021Article
- Influence of Genotype on High Glucosinolate Synthesis Lines ofInternational journal of molecular sciences · 2021Article
- Combination of genetic analysis and ancient literature survey reveals the divergence of traditional Brassica rapa varieties from Kyoto, Japan.Horticulture research · 2021Article
- Genetic analysis of the "head top shape" quality trait of Chinese cabbage and its association with rosette leaf variation.Horticulture research · 2021Article
- Series-Spatial Transcriptome Profiling of Leafy Head Reveals the Key Transition Leaves for Head Formation in Chinese Cabbage.Frontiers in plant science · 2021Article
- Upregulation of aProceedings of the National Academy of Sciences of the United States of America · 2020Article
- A chromosome-level reference genome of non-heading Chinese cabbage [Brassica campestris (syn. Brassica rapa) ssp. chinensis].Horticulture research · 2020Article
- Understanding Host-Pathogen Interactions inPlants (Basel, Switzerland) · 2020Review
- An ultra-high-density genetic map provides insights into genome synteny, recombination landscape and taproot skin colour in radish (Raphanus sativus L.).Plant biotechnology journal · 2020Article
- BcpLH organizes a specific subset of microRNAs to form a leafy head in Chinese cabbage (Horticulture research · 2020Article
Corrections and comments
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Authors and funding
6 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Leaf heads of cabbage (Brassica oleracea), Chinese cabbage (B. rapa), and lettuce (Lactuca sativa) are important vegetables that supply mineral nutrients, crude fiber and vitamins in the human diet. Head size, head shape, head weight, and heading time contribute to yield and quality. In an attempt to investigate genetic basis of leafy head in Chinese cabbage (B. rapa), we took advantage of recent technical advances of genome resequencing to perform quantitative trait locus (QTL) mapping using 150 recombinant inbred lines (RILs) derived from the cross between heading and non-heading Chinese cabbage. The resequenced genomes of the parents uncovered more than 1 million SNPs. Genotyping of RILs using the high-quality SNPs assisted by Hidden Markov Model (HMM) generated a recombination map. The raw genetic map revealed some physical assembly error and missing fragments in the reference genome that reduced the quality of SNP genotyping. By deletion of the genetic markers in which recombination rates higher than 20%, we have obtained a high-quality genetic map with 2209 markers and detected 18 QTLs for 6 head traits, from which 3 candidate genes were selected. These QTLs provide the foundation for study of genetic basis of leafy heads and the other complex traits.
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