Evidence map›Paper›PMID 24204320›Full record

ArticlePLoS genetics2013

Different roles of eukaryotic MutS and MutL complexes in repair of small insertion and deletion loops in yeast.

Nina V Romanova, Gray F Crouse

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 39 citations in OpenAlex.

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  14. Cytosine deamination and base excision repair cause R-loop-induced CAG repeat fragility and instability inProceedings of the National Academy of Sciences of the United States of America · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Nina V RomanovaDepartment of Biology, Emory University, Atlanta, Georgia, United States of America.
Gray F Crouse
Emory University · US

Funding

Cellular Responses to Radiation and Other Types of DamageR01GM080754 · NIGMS · EMORY UNIVERSITY · PI CROUSE, GRAY F. · 2009 to 2012
$1.2M
NIGMS NIH HHS R01 GM080754NIGMS NIH HHS R01 GM80754
6 · The paper itself

Abstract

DNA mismatch repair greatly increases genome fidelity by recognizing and removing replication errors. In order to understand how this fidelity is maintained, it is important to uncover the relative specificities of the different components of mismatch repair. There are two major mispair recognition complexes in eukaryotes that are homologues of bacterial MutS proteins, MutSα and MutSβ, with MutSα recognizing base-base mismatches and small loop mispairs and MutSβ recognizing larger loop mispairs. Upon recognition of a mispair, the MutS complexes then interact with homologues of the bacterial MutL protein. Loops formed on the primer strand during replication lead to insertion mutations, whereas loops on the template strand lead to deletions. We show here in yeast, using oligonucleotide transformation, that MutSα has a strong bias toward repair of insertion loops, while MutSβ has an even stronger bias toward repair of deletion loops. Our results suggest that this bias in repair is due to the different interactions of the MutS complexes with the MutL complexes. Two mutants of MutLα, pms1-G882E and pms1-H888R, repair deletion mispairs but not insertion mispairs. Moreover, we find that a different MutL complex, MutLγ, is extremely important, but not sufficient, for deletion repair in the presence of either MutLα mutation. MutSβ is present in many eukaryotic organisms, but not in prokaryotes. We suggest that the biased repair of deletion mispairs may reflect a critical eukaryotic function of MutSβ in mismatch repair.

Indexed as

Carrier ProteinsDNA-Binding ProteinsDNA DamageDNA Mismatch RepairDNA ReplicationINDEL MutationMutationMutL ProteinsMutS DNA Mismatch-Binding ProteinOligonucleotidesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTransformation, GeneticCarrier ProteinsDNA-Binding ProteinsMutL ProteinsMutS DNA Mismatch-Binding ProteinOligonucleotidesPMS1 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID24204320
PMCPMC3814323
OpenAlexW1993105831

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.