Evidence map›Paper›PMID 24204286›Full record

ArticlePLoS genetics2013

The integrator complex subunit 6 (Ints6) confines the dorsal organizer in vertebrate embryogenesis.

Lee D Kapp, Elliott W Abrams, Florence L Marlow, Mary C Mullins

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Neuronal differentiation requires BRAT1 complex to remove REST from chromatin.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. The Integrator Complex in Transcription and Development.Trends in biochemical sciences · 2020
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Lee D KappPerelman School of Medicine at the University of Pennsylvania, Department of Cell and Developmental Biology, Philadelphia, Pennsylvania, United States of America.
Elliott W Abrams
Florence L Marlow
Mary C Mullins
University of Pennsylvania · US

Funding

DORSAL/VENTRAL PATTERN FORMATION IN THE ZEBRAFISH EMBRYOR01GM056326 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI MULLINS, MARY C. · 1997 to 2018
$6.3M
TRAINING PROGRAM IN DEVELOPMENTAL BIOLOGYT32HD007516 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI RAPER, JONATHAN A · 1998 to 2012
$5.6M
Genetic analysis of ovary development and oogenesisR01HD050901 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI MULLINS, MARY C. · 2005 to 2009
$1.9M
Regulating the mid-blastula transition in zebrafishF32GM077835 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI ABRAMS, ELLIOTT W · 2006 to 2007
$99k
Maternal Control of Ventral Cell Fate Specification in the ZebrafishF32GM080926 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI KAPP, LEE · 2007 to 2008
$96k
NICHD NIH HHS R01 HD050901NICHD NIH HHS R01HD050901NICHD NIH HHS T32 HD007516NICHD NIH HHS T32-HD007516NIGMS NIH HHS 1F32GM080926NIGMS NIH HHS 5F32GM77835NIGMS NIH HHS F32 GM077835NIGMS NIH HHS F32 GM080926NIGMS NIH HHS R01 GM056326NIGMS NIH HHS R01GM56326
6 · The paper itself

Abstract

Dorsoventral patterning of the embryonic axis relies upon the mutual antagonism of competing signaling pathways to establish a balance between ventralizing BMP signaling and dorsal cell fate specification mediated by the organizer. In zebrafish, the initial embryo-wide domain of BMP signaling is refined into a morphogenetic gradient following activation dorsally of a maternal Wnt pathway. The accumulation of β-catenin in nuclei on the dorsal side of the embryo then leads to repression of BMP signaling dorsally and the induction of dorsal cell fates mediated by Nodal and FGF signaling. A separate Wnt pathway operates zygotically via Wnt8a to limit dorsal cell fate specification and maintain the expression of ventralizing genes in ventrolateral domains. We have isolated a recessive dorsalizing maternal-effect mutation disrupting the gene encoding Integrator Complex Subunit 6 (Ints6). Due to widespread de-repression of dorsal organizer genes, embryos from mutant mothers fail to maintain expression of BMP ligands, fail to fully express vox and ved, two mediators of Wnt8a, display delayed cell movements during gastrulation, and severe dorsalization. Consistent with radial dorsalization, affected embryos display multiple independent axial domains along with ectopic dorsal forerunner cells. Limiting Nodal signaling or restoring BMP signaling restores wild-type patterning to affected embryos. Our results are consistent with a novel role for Ints6 in restricting the vertebrate organizer to a dorsal domain in embryonic patterning.

Indexed as

Embryonic DevelopmentAnimalsbeta CateninBody PatterningBone Morphogenetic ProteinsCarrier ProteinsCell MovementCytoskeletal ProteinsDEAD-box RNA HelicasesEmbryo, NonmammalianFemaleGene Expression Regulation, DevelopmentalWnt ProteinsWnt Signaling PathwayZebrafishZebrafish Proteinsbeta CateninBone Morphogenetic ProteinsCarrier ProteinsCytoskeletal ProteinsDEAD-box RNA HelicasesInts6 protein, zebrafishwnt8a protein, zebrafishWnt ProteinsZebrafish Proteins

Identifiers

PMID24204286
PMCPMC3814294
OpenAlexW2043564298

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.