Evidence map›Paper›PMID 24199201›Full record

ArticleBioMed research international2013

Characteristics of clinical Shiga toxin-producing Escherichia coli isolated from British Columbia.

Kevin J Allen, Chad R Laing, Ana Cancarevic, Yongxiang Zhang, Lili R Mesak, Hai Xu, Ana Paccagnella, Victor P J Gannon, Linda Hoang

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Antibiotic Resistance in Shiga ToxigenicAntibiotics (Basel, Switzerland) · 2021
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Kevin J AllenFood, Nutrition and Health Program, Faculty of Land and Food Systems, University of British Columbia, 218-2205 East Mall, Vancouver, BC, Canada V6T 1Z4.
Chad R Laing
Ana Cancarevic
Yongxiang Zhang
Lili R Mesak
Hai Xu
Ana Paccagnella
Victor P J Gannon
Linda Hoang
Public Health Agency of Canada · CAUniversity of British Columbia · CABC Centre for Disease Control · CAShandong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shiga toxin-producing Escherichia coli (STEC) are significant public health threats. Although STEC O157 are recognized foodborne pathogens, non-O157 STEC are also important causes of human disease. We characterized 10 O157:H7 and 15 non-O157 clinical STEC derived from British Columbia (BC). Eae, hlyA, and stx were more frequently observed in STEC O157, and 80 and 100% of isolates possessed stx₁ and stx₂, respectively. In contrast, stx₁ and stx₂ occurred in 80 and 40% of non-O157 STEC, respectively. Comparative genomic fingerprinting (CGF) revealed three distinct clusters (C). STEC O157 was identified as lineage I (LI; LSPA-6 111111) and clustered as a single group (C1). The cdi gene previously observed only in LII was seen in two LI O157 isolates. CGF C2 strains consisted of diverse non-O157 STEC while C3 included only O103:H25, O118, and O165 serogroup isolates. With the exception of O121 and O165 isolates which were similar in virulence gene complement to STEC O157, C1 O157 STEC produced more Stx2 than non-O157 STEC. Antimicrobial resistance (AMR) screening revealed resistance or reduced sensitivity in all strains, with higher levels occurring in non-O157 STEC. One STEC O157 isolate possessed a mobile bla(CMY-2) gene transferrable across genre via conjugation.

Indexed as

Adhesins, BacterialBritish ColumbiaDNA, BacterialDNA FingerprintingDrug Resistance, BacterialEscherichia coli InfectionsEscherichia coli O157Escherichia coli ProteinsGenes, BacterialHemolysin ProteinsHumansSerotypingShiga-Toxigenic Escherichia coliShiga Toxin 1Shiga Toxin 2VirulenceAdhesins, BacterialDNA, BacterialeaeA protein, E coliEscherichia coli ProteinsHemolysin ProteinsHlya protein, E coliShiga Toxin 1Shiga Toxin 2

Identifiers

PMID24199201
PMCPMC3807556
OpenAlexW1980610257

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.