Evidence map›Paper›PMID 24197885›Full record

ArticleJournal of clinical microbiology2014

Discrimination of Mycobacterium abscessus subsp. massiliense from Mycobacterium abscessus subsp. abscessus in clinical isolates by multiplex PCR.

Kazue Nakanaga, Tsuyoshi Sekizuka, Hanako Fukano, Yumi Sakakibara, Fumihiko Takeuchi, Shinpei Wada, Norihisa Ishii, Masahiko Makino, Makoto Kuroda, Yoshihiko Hoshino

Abstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Trial
  2. Article
  3. Case Report:Frontiers in medicine · 2026
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  4. Review
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  6. Article
  7. Rapid identification of majorFrontiers in cellular and infection microbiology · 2025
    Article
  8. Microbiology spectrum · 2024
    Article
  9. Article
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  11. Antimicrobial agents and chemotherapy · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Clinical risk factors related to treatment failure in Mycobacterium abscessus lung disease.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kazue NakanagaLeprosy Research Center, National Institute of Infectious Diseases, Tokyo, Japan.
Tsuyoshi Sekizuka
Hanako Fukano
Yumi Sakakibara
Fumihiko Takeuchi
Shinpei Wada
Norihisa Ishii
Masahiko Makino
Makoto Kuroda
Yoshihiko Hoshino

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rapidly growing mycobacterium M. abscessus sensu lato is the causative agent of emerging pulmonary and skin diseases and of infections following cosmetic surgery and postsurgical procedures. M. abscessus sensu lato can be divided into at least three subspecies: M. abscessus subsp. abscessus, M. abscessus subsp. massiliense, and M. abscessus subsp. bolletii. Clinical isolates of rapidly growing mycobacteria were previously identified as M. abscessus by DNA-DNA hybridization. More than 30% of these 117 clinical isolates were differentiated as M. abscessus subsp. massiliense using combinations of multilocus genotyping analyses. A much more cost-effective technique to distinguish M. abscessus subsp. massiliense from M. abscessus subsp. abscessus, a multiplex PCR assay, was developed using the whole-genome sequence of M. abscessus subsp. massiliense JCM15300 as a reference. Several primer sets were designed for single PCR to discriminate between the strains based on amplicons of different sizes. Two of these single-PCR target sites were chosen for development of the multiplex PCR assay. Multiplex PCR was successful in distinguishing clinical isolates of M. abscessus subsp. massiliense from samples previously identified as M. abscessus. This approach, which spans whole-genome sequencing and clinical diagnosis, will facilitate the acquisition of more-precise information about bacterial genomes, aid in the choice of more relevant therapies, and promote the advancement of novel discrimination and differential diagnostic assays.

Indexed as

Bacteriological TechniquesDNA, BacterialDNA PrimersDNA, RibosomalGenome, BacterialHumansMolecular Diagnostic TechniquesMolecular Sequence DataMultiplex Polymerase Chain ReactionMycobacteriumMycobacterium Infections, NontuberculousRespiratory Tract InfectionsRNA, Ribosomal, 16SSequence Analysis, DNASkin Diseases, BacterialDNA, BacterialDNA PrimersDNA, RibosomalRNA, Ribosomal, 16S

Identifiers

PMID24197885
PMCPMC3911466

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.