Evidence map›Paper›PMID 24197692›Full record

ArticleMolecular biology reports2013

UBE2Q1 expression in human colorectal tumors and cell lines.

Sayed Mohammad Shafiee, Atefeh Seghatoleslam, Mohsen Nikseresht, Seyed Vahid Hosseini, Mahvash Alizadeh-Naeeni, Akbar Safaei, Ali Akbar Owji

Abstract read
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In one paragraph

Article in Molecular biology reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

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  6. Review
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  10. UBE2Q1, as a Down Regulated Gene in Pediatric Acute Lymphoblastic Leukemia.International journal of molecular and cellular medicine · 2014
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sayed Mohammad ShafieeDepartment of Biochemistry- Recombinant Protein Laboratory, Shiraz University of Medical Sciences, P.O Box 1167, Shiraz, Iran.
Atefeh Seghatoleslam
Mohsen Nikseresht
Seyed Vahid Hosseini
Mahvash Alizadeh-Naeeni
Akbar Safaei
Ali Akbar Owji
Shiraz University of Medical Sciences · IRYasuj University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal cancer is the third most common cancer in the world. Ubiquitin-proteasome system has shown to be activated in colorectal and other malignancies. UBE2Q1 is a novel human gene that encodes a putative E2 ubiquitin conjugating enzyme. Here, we investigated the expression pattern of UBE2Q1 gene in cell lines and tissues from human colorectal tumors. Quantitative (q) RT-PCR were employed to evaluate the expression levels of the mRNA for UBE2Q1 in colorectal cancer cell lines (HT29/219, LS180, SW742, Caco2, HTC116, SW48, SW480 and SW1116). Expression of UBE2Q1 at the protein levels were assessed by Western blotting in cell lines as well as in 43 human colorectal tumor tissues. All cell lines tested expressed UBE2Q1 gene at the level of both mRNA and protein, with the SW1116 line representing the lowest level of expression. The cell lines HT29/219 and SW742 showed the highest levels of UBE2Q1 protein and mRNA respectively. When compared to corresponding normal tissues, malignant parts of colorectal tumors showed increased levels of UBE2Q1 immunoreactivity in 32 (74.42 %) of cases. These data suggest that UBE2Q1 is differentially expressed in colorectal cell lines and shows overexpression in colorectal tumors.

Indexed as

Gene Expression Regulation, NeoplasticAdultAgedCell Line, TumorColorectal NeoplasmsFemaleHumansMaleMiddle AgedRNA, MessengerTransfectionUbiquitin-Conjugating EnzymesRNA, MessengerUBE2Q1 protein, humanUbiquitin-Conjugating Enzymes

Identifiers

PMID24197692
OpenAlexW2028854305

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.