Evidence map›Paper›PMID 24196718›Full record

ArticleNature2013

RNA catalyses nuclear pre-mRNA splicing.

Sebastian M Fica, Nicole Tuttle, Thaddeus Novak, Nan-Sheng Li, Jun Lu, Prakash Koodathingal, Qing Dai, Jonathan P Staley, Joseph A Piccirilli

Open access · greenAbstract read
In one paragraph

Article in Nature, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 190 papers.

0numbers the graph read from it
0cells of the map it votes in
190citing papers in PubMed
18.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

190 citing papers in PubMed, 339 citations in OpenAlex.

  1. Article
  2. RNA splicing in health and disease.Molecular biomedicine · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Enzymology of the metazoan tRNA ligase complex: a lifetime in cycles.Cellular and molecular life sciences : CMLS · 2026
    Review
  8. Article
  9. Review
  10. Structure, function and assembly of nuclear pore complexes.Nature reviews. Molecular cell biology · 2026
    Review
  11. Review
  12. Viral interference of nucleocytoplasmic transport.The Journal of biological chemistry · 2025
    Review
  13. Article
  14. Article
  15. Principles ofJournal of the Royal Society, Interface · 2025
    Article
  16. Article
  17. Article
  18. GL4SDA: Predicting snoRNA-disease associations using GNNs and LLM embeddings.Computational and structural biotechnology journal · 2025
    Article
  19. Review
  20. Review

130 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Sebastian M Fica1] Graduate Program in Cell and Molecular Biology, The University of Chicago, Chicago, Illinois 60637, USA [2] Department of Molecular Genetics and Cell Biology, Cummings Life Sciences Center, 920 East 58th Street, The University of Chicago, Chicago, Illinois 60637, USA [3].
Nicole Tuttle
Thaddeus Novak
Nan-Sheng Li
Jun Lu
Prakash Koodathingal
Qing Dai
Jonathan P Staley
Joseph A Piccirilli
University of Chicago · US

Funding

Predoctoral Training Program in Chemistry & BiologyT32GM008720 · NIGMS · UNIVERSITY OF CHICAGO · PI PICCIRILLI, JOSEPH ANTHONY · 1999 to 2020
$4.7M
The Catalytic Mechanism of Nuclear Premessenger RNA Splicing by the SpliceosomeR01GM088656 · NIGMS · UNIVERSITY OF CHICAGO · PI PICCIRILLI, JOSEPH ANTHONY, STALEY, JONATHAN P · 2010 to 2017
$4.2M
NIGMS NIH HHS 5T32GM008720NIGMS NIH HHS R01 GM088656NIGMS NIH HHS R01GM088656NIGMS NIH HHS T32 GM008720
6 · The paper itself

Abstract

In nuclear pre-messenger RNA splicing, introns are excised by the spliceosome, a dynamic machine composed of both proteins and small nuclear RNAs (snRNAs). Over thirty years ago, after the discovery of self-splicing group II intron RNAs, the snRNAs were proposed to catalyse splicing. However, no definitive evidence for a role of either RNA or protein in catalysis by the spliceosome has been reported so far. By using metal rescue strategies in spliceosomes from budding yeast, here we show that the U6 snRNA catalyses both of the two splicing reactions by positioning divalent metals that stabilize the leaving groups during each reaction. Notably, all of the U6 catalytic metal ligands we identified correspond to the ligands observed to position catalytic, divalent metals in crystal structures of a group II intron RNA. These findings indicate that group II introns and the spliceosome share common catalytic mechanisms and probably common evolutionary origins. Our results demonstrate that RNA mediates catalysis within the spliceosome.

Indexed as

RNA SplicingCatalysisCell NucleusIntronsMetalsModels, BiologicalRNA, FungalRNA PrecursorsRNA, Small NuclearSaccharomyces cerevisiaeSpliceosomesMetalsRNA, FungalRNA PrecursorsRNA, Small NuclearU6 small nuclear RNA

Identifiers

PMID24196718
PMCPMC4666680
OpenAlexW2035133245

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.