Evidence map›Paper›PMID 24196393›Full record

ArticleEpigenetics2014

A long non-coding RNA promotes full activation of adult gene expression in the chicken α-globin domain.

Cristian Arriaga-Canon, Yael Fonseca-Guzmán, Christian Valdes-Quezada, Rodrigo Arzate-Mejía, Georgina Guerrero, Félix Recillas-Targa

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

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  15. LncRNA-Six1 Encodes a Micropeptide to ActivateFrontiers in physiology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Cristian Arriaga-CanonInstituto de Fisiología Celular; Departamento de Genética Molecular; Universidad Nacional Autónoma de México; Distrito Federal, México.
Yael Fonseca-GuzmánInstituto de Fisiología Celular; Departamento de Genética Molecular; Universidad Nacional Autónoma de México; Distrito Federal, México.
Christian Valdes-QuezadaInstituto de Fisiología Celular; Departamento de Genética Molecular; Universidad Nacional Autónoma de México; Distrito Federal, México.
Rodrigo Arzate-MejíaInstituto de Fisiología Celular; Departamento de Genética Molecular; Universidad Nacional Autónoma de México; Distrito Federal, México.
Georgina GuerreroInstituto de Fisiología Celular; Departamento de Genética Molecular; Universidad Nacional Autónoma de México; Distrito Federal, México.
Félix Recillas-TargaInstituto de Fisiología Celular; Departamento de Genética Molecular; Universidad Nacional Autónoma de México; Distrito Federal, México.
Universidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long non-coding RNAs (lncRNAs) were recently shown to regulate chromatin remodelling activities. Their function in regulating gene expression switching during specific developmental stages is poorly understood. Here we describe a nuclear, non-coding transcript responsive for the stage-specific activation of the chicken adult α(D) globin gene. This non-coding transcript, named α-globin transcript long non-coding RNA (lncRNA-αGT) is transcriptionally upregulated in late stages of chicken development, when active chromatin marks the adult α(D) gene promoter. Accordingly, the lncRNA-αGT promoter drives erythroid-specific transcription. Furthermore, loss of function experiments showed that lncRNA-αGT is required for full activation of the α(D) adult gene and maintenance of transcriptionally active chromatin. These findings uncovered lncRNA-αGT as an important part of the switching from embryonic to adult α-globin gene expression, and suggest a function of lncRNA-αGT in contributing to the maintenance of adult α-globin gene expression by promoting an active chromatin structure.

Indexed as

alpha-GlobinsAnimalsCell DifferentiationCell LineChickensChromatinRNA, Long NoncodingTranscriptional Activationalpha-GlobinsChromatinRNA, Long Noncodingchromatindevelopmenterythroid differentiationglobin geneslong non-coding RNA

Identifiers

PMID24196393
PMCPMC3928180
OpenAlexW2046381665

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.