Evidence map›Paper›PMID 24194896›Full record

ArticlePloS one2013

Pannexin1 channel proteins in the zebrafish retina have shared and unique properties.

Sarah Kurtenbach, Nora Prochnow, Stefan Kurtenbach, Jan Klooster, Christiane Zoidl, Rolf Dermietzel, Maarten Kamermans, Georg Zoidl

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 46 citations in OpenAlex.

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  6. CaProceedings of the National Academy of Sciences of the United States of America · 2024
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  18. Disassembly of dying cells in diverse organisms.Cellular and molecular life sciences : CMLS · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Sarah KurtenbachNeuroanatomy, Faculty of Medicine, Ruhr University Bochum, Bochum, Germany ; Psychology, Faculty of Health, York University, Toronto, Ontario, Canada.
Nora Prochnow
Stefan Kurtenbach
Jan Klooster
Christiane Zoidl
Rolf Dermietzel
Maarten Kamermans
Georg Zoidl
Ruhr University Bochum · DEYork University · CAAcademic Medical Center · NLNetherlands Institute for Neuroscience · NL

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

In mammals, a single pannexin1 gene (Panx1) is widely expressed in the CNS including the inner and outer retinae, forming large-pore voltage-gated membrane channels, which are involved in calcium and ATP signaling. Previously, we discovered that zebrafish lack Panx1 expression in the inner retina, with drPanx1a exclusively expressed in horizontal cells of the outer retina. Here, we characterize a second drPanx1 protein, drPanx1b, generated by whole-genome duplications during teleost evolution. Homology searches strongly support the presence of pannexin sequences in cartilaginous fish and provide evidence that pannexins evolved when urochordata and chordata evolution split. Further, we confirm Panx1 ohnologs being solely present in teleosts. A hallmark of differential expression of drPanx1a and drPanx1b in various zebrafish brain areas is the non-overlapping protein localization of drPanx1a in the outer and drPanx1b in the inner fish retina. A functional comparison of the evolutionary distant fish and mouse Panx1s revealed both, preserved and unique properties. Preserved functions are the capability to form channels opening at resting potential, which are sensitive to known gap junction and hemichannel blockers, intracellular calcium, extracellular ATP and pH changes. However, drPanx1b is unique due to its highly complex glycosylation pattern and distinct electrophysiological gating kinetics. The existence of two Panx1 proteins in zebrafish displaying distinct tissue distribution, protein modification and electrophysiological properties, suggests that both proteins fulfill different functions in vivo.

Indexed as

Evolution, MolecularPhylogenyAnimalsBase SequenceBlotting, WesternConnexinsGene Expression RegulationImmunohistochemistryKineticsMicroscopy, ConfocalMolecular Sequence DataMutagenesis, Site-DirectedOligonucleotidesPatch-Clamp TechniquesProtein IsoformsReal-Time Polymerase Chain ReactionConnexinsOligonucleotidespanx1a protein, zebrafishProtein IsoformsZebrafish Proteins

Identifiers

PMID24194896
PMCPMC3808535
OpenAlexW2001773416

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.