Evidence map›Paper›PMID 24194602›Full record

ArticleNucleic acids research2014

DDBJ progress report: a new submission system for leading to a correct annotation.

Takehide Kosuge, Jun Mashima, Yuichi Kodama, Takatomo Fujisawa, Eli Kaminuma, Osamu Ogasawara, Kousaku Okubo, Toshihisa Takagi, Yasukazu Nakamura

Abstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Public Health and Project Management: Do Projects Deliver?International journal of environmental research and public health · 2020
    Article
  2. Review
  3. DNA Data Bank of Japan: 30th anniversary.Nucleic acids research · 2018
    Article
  4. DNA Data Bank of Japan.Nucleic acids research · 2017
    Article
  5. Article
  6. GenBank.Nucleic acids research · 2016
    Article
  7. Comparative Characterization of the Leaf Tissue ofFrontiers in plant science · 2016
    Article
  8. The Ensembl gene annotation system.Database : the journal of biological databases and curation · 2016
    Article
  9. Genomic-Wide Analysis with Microarrays in Human Oncology.Microarrays (Basel, Switzerland) · 2015
    Review
  10. Article
  11. Biological databases for human research.Genomics, proteomics & bioinformatics · 2015
    Review
  12. Article
  13. Article
  14. Genenames.org: the HGNC resources in 2015.Nucleic acids research · 2015
    Article
  15. GenBank.Nucleic acids research · 2015
    Article
  16. NCBI viral genomes resource.Nucleic acids research · 2015
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Takehide KosugeDDBJ Center, National Institute of Genetics, Yata 1111, Mishima, Shizuoka 411-8540, Japan and National Bioscience Database Center, Japan Science and Technology Agency, Tokyo 102-8666, Japan.
Jun Mashima
Yuichi Kodama
Takatomo Fujisawa
Eli Kaminuma
Osamu Ogasawara
Kousaku Okubo
Toshihisa Takagi
Yasukazu Nakamura

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The DNA Data Bank of Japan (DDBJ; http://www.ddbj.nig.ac.jp) maintains and provides archival, retrieval and analytical resources for biological information. This database content is shared with the US National Center for Biotechnology Information (NCBI) and the European Bioinformatics Institute (EBI) within the framework of the International Nucleotide Sequence Database Collaboration (INSDC). DDBJ launched a new nucleotide sequence submission system for receiving traditional nucleotide sequence. We expect that the new submission system will be useful for many submitters to input accurate annotation and reduce the time needed for data input. In addition, DDBJ has started a new service, the Japanese Genotype-phenotype Archive (JGA), with our partner institute, the National Bioscience Database Center (NBDC). JGA permanently archives and shares all types of individual human genetic and phenotypic data. We also introduce improvements in the DDBJ services and databases made during the past year.

Indexed as

Base SequenceDatabases, Nucleic AcidMolecular Sequence AnnotationGenomicsGenotypeHigh-Throughput Nucleotide SequencingHumansInternetPhenotype

Identifiers

PMID24194602
PMCPMC3964987

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.