Evidence map›Paper›PMID 24194124›Full record

ArticleMolecular and cellular biochemistry2014

Identification of a farnesol analog as a Ras function inhibitor using both an in vivo Ras activation sensor and a phenotypic screening approach.

Kamalakkannan Srinivasan, Thangaiah Subramanian, H Peter Spielmann, Chris Janetopoulos

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Kamalakkannan SrinivasanDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, 37232, USA.
Thangaiah Subramanian
H Peter Spielmann
Chris Janetopoulos
Vanderbilt University · USMarkey Cancer Center · USUniversity of Kentucky · US

Funding

Synthetic Probes of Protein PrenylationR01GM066152 · NIGMS · UNIVERSITY OF KENTUCKY · PI SPIELMANN, H PETER · 2002 to 2011
$2.5M
PI(3,4,5)P3 Regulates Cell Polarity During Chemotaxis and CytokinesisR01GM080370 · NIGMS · VANDERBILT UNIVERSITY · PI JANETOPOULOS, CHRISTOPHER J · 2008 to 2012
$1.4M
NIGMS NIH HHS R01 GM066152NIGMS NIH HHS R01 GM080370NIGMS NIH HHS R01 GM66152
6 · The paper itself

Abstract

Mutations in Ras isoforms such as K-Ras, N-Ras, and H-Ras contribute to roughly 85, 15, and 1% of human cancers, respectively. Proper membrane targeting of these Ras isoforms, a prerequisite for Ras activity, requires farnesylation or geranylgeranylation at the C-terminal CAAX box. We devised an in vivo screening strategy based on monitoring Ras activation and phenotypic physiological outputs for assaying synthetic Ras function inhibitors (RFI). Ras activity was visualized by the translocation of RBD Raf1 -GFP to activated Ras at the plasma membrane. By using this strategy, we screened one synthetic farnesyl substrate analog (AGOH) along with nine putative inhibitors and found that only m-CN-AGOH inhibited Ras activation. Phenotypic analysis of starving cells could be used to monitor polarization, motility, and the inability of these treated cells to aggregate properly during fruiting body formation. Incorporation of AGOH and m-CN-AGOH to cellular proteins was detected by western blot. These screening assays can be incorporated into a high throughput screening format using Dictyostelium discoideum and automated microscopy to determine effective RFIs. These RFI candidates can then be further tested in mammalian systems.

Indexed as

Aniline CompoundsAntineoplastic AgentsCell PolarityDictyosteliumDrug Screening Assays, AntitumorEnzyme ActivationHigh-Throughput Screening AssaysHumansMonoterpenesPhenotyperas ProteinsAniline CompoundsAntineoplastic AgentsMonoterpenesras Proteins

Identifiers

PMID24194124
PMCPMC3946829
OpenAlexW2057890630

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.