Evidence map›Paper›PMID 24192486›Full record

ArticleDNA repair2013

The conserved Fanconi anemia nuclease Fan1 and the SUMO E3 ligase Pli1 act in two novel Pso2-independent pathways of DNA interstrand crosslink repair in yeast.

Y Fontebasso, T J Etheridge, A W Oliver, J M Murray, A M Carr

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in DNA repair, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Y FontebassoGenome Damage and Stability Centre, University of Sussex, Brighton, East Sussex BN1 9RQ, UK; Breakthrough Breast Cancer Research Centre, The Institute of Cancer Research, 237 Fulham Road, London SW3 6JB, UK.
T J Etheridge
A W Oliver
J M Murray
A M Carr
University of Sussex · GBInstitute of Cancer Research · GB

Funding

Cancer Research UK 14532Medical Research Council G0500308Medical Research Council G1100074
6 · The paper itself

Abstract

DNA interstrand cross-links (ICLs) represent a physical barrier to the progression of cellular machinery involved in DNA metabolism. Thus, this type of adduct represents a serious threat to genomic stability and as such, several DNA repair pathways have evolved in both higher and lower eukaryotes to identify this type of damage and restore the integrity of the genetic material. Human cells possess a specialized ICL-repair system, the Fanconi anemia (FA) pathway. Conversely yeasts rely on the concerted action of several DNA repair systems. Recent work in higher eukaryotes identified and characterized a novel conserved FA component, FAN1 (Fanconi anemia-associated nuclease 1, or FANCD2/FANCI-associated nuclease 1). In this study, we characterize Fan1 in the yeast Schizosaccharomyces pombe. Using standard genetics, we demonstrate that Fan1 is a key component of a previously unidentified ICL-resolution pathway. Using high-throughput synthetic genetic arrays, we also demonstrate the existence of a third pathway of ICL repair, dependent on the SUMO E3 ligase Pli1. Finally, using sequence-threaded homology models, we predict and validate key residues essential for Fan1 activity in ICL repair.

Indexed as

DNA RepairDNA DamageEndodeoxyribonucleasesEsterasesEvolution, MolecularHigh-Throughput Screening AssaysLigasesModels, MolecularMutation RateProtein Structure, TertiaryRecombination, GeneticSchizosaccharomycesSchizosaccharomyces pombe ProteinsSequence HomologySignal TransductionUbiquitin-Protein LigasesEndodeoxyribonucleasesEsterasesFanconi anemia-associated nuclease 1, S pombeLigasesPli1 protein, S pombeRad13 protein, S pombeSchizosaccharomyces pombe ProteinsUbiquitin-Protein LigasesCisplatinEpistasisGenetic screenICLSchizosaccharomyces pombeSynthetic array

Identifiers

PMID24192486
PMCPMC4045212
OpenAlexW2017134617

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.