Evidence map›Paper›PMID 24192459›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2014

Serotonergic neuron regulation informed by in vivo single-cell transcriptomics.

Jennifer M Spaethling, David Piel, Hannah Dueck, Peter T Buckley, Jacqueline F Morris, Stephen A Fisher, Jaehee Lee, Jai-Yoon Sul, Junhyong Kim, Tamas Bartfai and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Review
  3. Molecular Organization of Autonomic, Respiratory, and Spinally-Projecting Neurons in the Mouse Ventrolateral Medulla.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  4. Article
  5. Spatiotemporal Control of Noradrenaline-Dependent Synaptic Transmission in Mouse Dorsal Raphe Serotonin Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Serotonergic modulation across sensory modalities.Journal of neurophysiology · 2020
    Review
  11. Article
  12. Review
  13. Article
  14. Embracing diversity in the 5-HT neuronal system.Nature reviews. Neuroscience · 2019
    Review
  15. GPCRomics: An Approach to Discover GPCR Drug Targets.Trends in pharmacological sciences · 2019
    Review
  16. Article
  17. Serotonin neuron development: shaping molecular and structural identities.Wiley interdisciplinary reviews. Developmental biology · 2018
    Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Jennifer M Spaethling2University of Pennsylvania, 37 John Morgan Bldg., 3620 Hamilton Walk, Philadelphia, PA 19104, USA. eberwine@upenn.edu.
David Piel
Hannah Dueck
Peter T Buckley
Jacqueline F Morris
Stephen A Fisher
Jaehee Lee
Jai-Yoon Sul
Junhyong Kim
Tamas Bartfai
Sheryl G Beck
James H Eberwine
University of Pennsylvania · USChildren's Hospital of Philadelphia · USScripps Research Institute · US

Funding

Cellular logic of phenotypeDP1OD004117 · OD · UNIVERSITY OF PENNSYLVANIA · PI EBERWINE, JAMES H · 2008 to 2011
$3.1M
Regulation of Dorsal and Medial Raphe Neural ActivityR01MH075047 · NIMH · CHILDREN'S HOSP OF PHILADELPHIA · PI BECK, SHERYL G · 2006 to 2010
$1.7M
NIH HHS DP1 OD004117NIH HHS DP1OD004117NIMH NIH HHS MH075047NIMH NIH HHS R01 MH075047
6 · The paper itself

Abstract

Despite the recognized importance of the dorsal raphe (DR) serotonergic (5-HT) nuclei in the pathophysiology of depression and anxiety, the molecular components/putative drug targets expressed by these neurons are poorly characterized. Utilizing the promoter of an ETS domain transcription factor that is a stable marker of 5-HT neurons (Pet-1) to drive 5-HT neuronal expression of YFP, we identified 5-HT neurons in live acute slices. We isolated RNA from single 5-HT neurons in the ventromedial and lateral wings of the DR and performed single-cell RNA-Seq analysis identifying >500 G-protein coupled receptors (GPCRs) including receptors for classical transmitters, lipid signals, and peptides as well as dozens of orphan-GPCRs. Using these data to inform our selection of receptors to assess, we found that oxytocin and lysophosphatidic acid 1 receptors are translated and active in costimulating, with the α1-adrenergic receptor, the firing of DR 5-HT neurons, while the effects of histamine are inhibitory and exerted at H3 histamine receptors. The inhibitory histamine response provides evidence for tonic in vivo histamine inhibition of 5-HT neurons. This study illustrates that unbiased single-cell transcriptomics coupled with functional analyses provides novel insights into how neurons and neuronal systems are regulated.

Indexed as

AnimalsElectrophysiologyIn Vitro TechniquesMaleMiceReceptors, G-Protein-CoupledSerotonergic NeuronsSerotoninReceptors, G-Protein-CoupledSerotonindorsal rapheelectophysiologyGPCRhistamineRNA-Seq

Identifiers

PMID24192459
PMCPMC3898651
OpenAlexW2144217996

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.