Evidence map›Paper›PMID 24191055›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Dysregulation of synaptogenesis genes antecedes motor neuron pathology in spinal muscular atrophy.

Zhenxi Zhang, Anna Maria Pinto, Lili Wan, Wei Wang, Michael G Berg, Isabela Oliva, Larry N Singh, Christopher Dengler, Zhi Wei, Gideon Dreyfuss

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 133 papers.

0numbers the graph read from it
0cells of the map it votes in
133citing papers in PubMed
10.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

133 citing papers in PubMed, 187 citations in OpenAlex.

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  6. Neurodegenerative spliceosomopathies.Frontiers in cell and developmental biology · 2026
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73 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Zhenxi ZhangDepartment of Biochemistry and Biophysics, Howard Hughes Medical Institute, University of Pennsylvania School of Medicine, Philadelphia, PA 19104-6148.
Anna Maria Pinto
Lili Wan
Wei Wang
Michael G Berg
Isabela Oliva
Larry N Singh
Christopher Dengler
Zhi Wei
Gideon Dreyfuss
Howard Hughes Medical Institute · USInstitute of Molecular Biology and Biophysics · RUNew Jersey Institute of Technology · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

The motor neuron (MN) degenerative disease, spinal muscular atrophy (SMA) is caused by deficiency of SMN (survival motor neuron), a ubiquitous and indispensable protein essential for biogenesis of snRNPs, key components of pre-mRNA processing. However, SMA's hallmark MN pathology, including neuromuscular junction (NMJ) disruption and sensory-motor circuitry impairment, remains unexplained. Toward this end, we used deep RNA sequencing (RNA-seq) to determine if there are any transcriptome changes in MNs and surrounding spinal cord glial cells (white matter, WM) microdissected from SMN-deficient SMA mouse model at presymptomatic postnatal day 1 (P1), before detectable MN pathology (P4-P5). The RNA-seq results, previously unavailable for SMA at any stage, revealed cell-specific selective mRNA dysregulations (~300 of 11,000 expressed genes in each, MN and WM), many of which are known to impair neurons. Remarkably, these dysregulations include complete skipping of agrin's Z exons, critical for NMJ maintenance, strong up-regulation of synapse pruning-promoting complement factor C1q, and down-regulation of Etv1/ER81, a transcription factor required for establishing sensory-motor circuitry. We propose that dysregulation of such specific MN synaptogenesis genes, compounded by many additional transcriptome abnormalities in MNs and WM, link SMN deficiency to SMA's signature pathology.

Indexed as

AnimalsBase SequenceComplement C1qDNA-Binding ProteinsFluorescent Antibody TechniqueGene Expression RegulationHumansMiceMolecular Sequence DataMotor NeuronsMuscular Atrophy, SpinalNeurogliaRNA, MessengerSequence Analysis, RNASMN Complex ProteinsSynapsesComplement C1qDNA-Binding ProteinsEtv1 protein, mouseRNA, MessengerSMN Complex ProteinsTranscription FactorsC1q complextranscriptome perturbationsZ+ (neuronal) agrin

Identifiers

PMID24191055
PMCPMC3845193
OpenAlexW2118748690

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.