Evidence map›Paper›PMID 24189494›Full record

ArticleBiochimica et biophysica acta2013

Bcrp1 transcription in mouse testis is controlled by a promoter upstream of a novel first exon (E1U) regulated by steroidogenic factor-1.

Yi Xie, Karthika Natarajan, Kenneth S Bauer, Takeo Nakanishi, William T Beck, Rebecca S Moreci, Pancharatnam Jeyasuria, Arif Hussain, Douglas D Ross

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Yi XieGreenebaum Cancer Center, University of Maryland School of Medicine, Baltimore, MD 21201, USA; Baltimore VA Medical Center, Baltimore, MD 21201, USA.
Karthika Natarajan
Kenneth S Bauer
Takeo Nakanishi
William T Beck
Rebecca S Moreci
Pancharatnam Jeyasuria
Arif Hussain
Douglas D Ross
University of Maryland, Baltimore · USUniversity of Pittsburgh · USBaltimore VA Medical Center · USKanazawa University · JPU-M Rogel Cancer CenterUniversity of Illinois Chicago · US

Funding

CHARACTERISTICS OF MULTIPLE DRUG RESISTANCE--HUMAN TUMORR01CA040570 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI BECK, WILLIAM T · 1985 to 2010
$2.4M
NCI NIH HHS CA40570NCI NIH HHS R01 CA040570
6 · The paper itself

Abstract

Alternative promoter usage is typically associated with mRNAs with differing first exons that contain or consist entirely of a 5' untranslated region. The murine Bcrp1 (Abcg2) transporter has three alternative promoters associated with mRNAs containing alternative untranslated first exons designated as E1A, E1B, and E1C. The E1B promoter regulates Bcrp1 transcription in mouse intestine. Here, we report the identification and characterization of a novel Bcrp1 promoter and first exon, E1U, located upstream from the other Bcrp1 promoters/first exons, which is the predominant alternative promoter utilized in murine testis. Using in silico analysis we identified a putative steroidogenic factor-1 (SF-1) response element that was unique to the Bcrp1 E1U alternative promoter. Overexpression of SF-1 in murine TM4 Sertoli cells enhanced Bcrp1 E1U mRNA expression and increased Bcrp1 E1U alternative promoter activity in a reporter assay, whereas mutation of the SF-1 binding site totally eliminated Bcrp1 E1U alternative promoter activity. Moreover, expression of Bcrp1 E1U and total mRNA and Bcrp1 protein was markedly diminished in the testes from adult Sertoli cell-specific SF-1 knockout mice, in comparison to the testes from wild-type mice. Binding of SF-1 to the SF-1 response element in the E1U promoter was demonstrated by chromatin immunoprecipitation assays. In conclusion, nuclear transcription factor SF-1 is involved with the regulation of a novel promoter of Bcrp1 that governs transcription of the E1U mRNA isoform in mice. The present study furthers understanding of the complex regulation of Bcrp1 expression in specific tissues of a mammalian model.

Indexed as

Gene Expression Regulation5' Untranslated RegionsAnimalsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily G, Member 2Blotting, WesternCells, CulturedChromatin ImmunoprecipitationDNA-Binding ProteinsExonsLuciferasesMaleMiceMice, Inbred C57BLMice, KnockoutMutation5' Untranslated RegionsAbcg2 protein, mouseATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily G, Member 2DNA-Binding ProteinsLuciferasesRNA, MessengerRNA Splicing FactorsSf1 protein, mouseTranscription Factors5′ untranslated region5′ UTRBreast cancer resistance protein (ABCG2)MousePromoterSF-1steroidogenic factor-1Steroidogenic factor-1 (SF-1)Testistranscriptional start siteTSS

Identifiers

PMID24189494
PMCPMC3873745
OpenAlexW2015958124

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.